Salinimonas sediminis: D0Y50_05870
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Entry
D0Y50_05870 CDS
T05624
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
salm
Salinimonas sediminis
Pathway
salm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
salm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D0Y50_05870 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salm03400
]
D0Y50_05870 (ruvB)
Enzymes [BR:
salm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D0Y50_05870 (ruvB)
DNA repair and recombination proteins [BR:
salm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D0Y50_05870 (ruvB)
RecFOR pathway proteins
D0Y50_05870 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
AAA_14
Mg_chelatase
AAA_3
AAA_16
nSTAND3
RNA_helicase
Rad17
TIP49
NTPase_1
AAA_18
AAA_17
AAA_2
Bac_DnaA
NB-ARC
TniB
Sigma54_activ_2
AAA_28
AAA_24
ABC_tran
TsaE
NPHP3_N
IstB_IS21
CagL
Motif
Other DBs
NCBI-ProteinID:
AXR05951
UniProt:
A0A346NK94
LinkDB
All DBs
Position
1310858..1311862
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AA seq
334 aa
AA seq
DB search
MIEADRLIGGAATHEDEVIDRAIRPKMLSDYTGQAHVCEQMEIFIQAARNREDALDHLLI
FGPPGLGKTTLANIVANEMGVNIKTTSGPVLEKAGDLAALLTNLERNDVLFIDEIHRLSP
VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGSLTSPLRDRFGIVQR
LEFYSVADLTTIISRSANYLNLNMDEQGAFEVAKRSRGTPRIANRLLRRVRDYAEIKANG
EVTSAVAASALDMLDVDKQGFDYMDRKLLLAIIEKFDGGPVGLDNLAAAIGEEKETIEDV
IEPFLIQQGFLQRTPRGRIVQQRAYLHFGFQPDQ
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagcagatcgtctgattggcggcgccgcgacccacgaagatgaagtgatagac
cgggctatccggcctaagatgctcagtgactatactggtcaggcgcatgtttgcgagcaa
atggagatattcattcaggccgcgcgtaaccgggaagatgcattagatcatctgctcatt
tttgggcctcccggcttgggtaaaacgacgctggctaatattgtggccaatgaaatgggc
gtgaacatcaaaaccacttccggcccggtgcttgaaaaagccggcgacctggctgcgttg
ttgaccaatcttgagcgcaacgatgttctgtttatcgacgagattcatcgcctaagcccg
gtggtggaggaaatactgtatccggccatggaagactatcagctggatatcatgattggc
gaagggccggcggctcgctcaatcaaacttgatttaccccccttcacgttaatcggcgct
acgacccgcgccggctcgctgacctcgcctctgcgtgaccgctttggaattgttcaacgc
ctggaattttactcggtggccgacctgactactattatctcgcgcagtgccaattacctg
aatttaaatatggatgaacaaggcgcgtttgaggtagcaaaacgctcgcggggcacccca
cgtatcgccaaccgcctattgcgacgggttcgggattatgcggaaattaaagccaatggc
gaggtaaccagtgcggtagcggcaagcgcgttggatatgctggatgtggataagcaaggt
tttgattatatggaccgcaagttgttgctggctattatcgagaagtttgatggagggccg
gtggggctcgacaatttggcagcggcaattggcgaggaaaaagaaactatagaagatgtt
attgagccattcttaattcaacaaggtttcttgcagcgcacaccgcgcgggcgtatcgtc
cagcagcgcgcctatcttcactttggttttcagcccgaccagtaa
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