Salinimonas sediminis: D0Y50_07975
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Entry
D0Y50_07975 CDS
T05624
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
salm
Salinimonas sediminis
Pathway
salm03030
DNA replication
salm03430
Mismatch repair
salm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
salm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D0Y50_07975 (holB)
03430 Mismatch repair
D0Y50_07975 (holB)
03440 Homologous recombination
D0Y50_07975 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salm03032
]
D0Y50_07975 (holB)
03400 DNA repair and recombination proteins [BR:
salm03400
]
D0Y50_07975 (holB)
Enzymes [BR:
salm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D0Y50_07975 (holB)
DNA replication proteins [BR:
salm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D0Y50_07975 (holB)
DNA repair and recombination proteins [BR:
salm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D0Y50_07975 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
RuvB_N
nSTAND3
AAA_22
AAA_5
TraI_hel_assoc_N
Sigma54_activ_2
Phospholamban
AAA_18
Rad17
GoLoco
Motif
Other DBs
NCBI-ProteinID:
AXR06304
UniProt:
A0A346NL97
LinkDB
All DBs
Position
1769217..1770104
Genome browser
AA seq
295 aa
AA seq
DB search
MSVVPWFATRYSRLLARLQSRRLHHGLLLTGPPGIGKYQFARLLAKSALCKALTPQGYCS
ACQSCLLFDAGNHPDMAELVSDKQLGVDAIRGGIAKLHATAQLNGNKVLVIPQAHRMTEP
AANALLKTLEEPTDNTFLVLITDRPQQLLATIVSRCEKHVMPPPDTEQALGWLREQGVDD
ATPALLHAYGAAPFTLLQALREETGIAYRTFREGLDTLLAGGNDAVTLATQWQDSAPSIV
GWLQQYAHEQCVQYPNASSFSLFEACTQANRMLQNPGVNKVMILSCLLAEIKQSV
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtagtaccttggtttgctacccgctatagccgtttgcttgctcgcctgcaaagc
cgtcgcttgcatcatggattattgcttaccgggccgcccggtataggcaagtatcaattc
gcccggttactggcaaaatcagcgttgtgtaaagcacttacgccgcaagggtattgctcg
gcctgtcagtcgtgtttattgtttgatgcaggtaaccatcccgacatggctgaactggta
agcgataaacaattgggagtggatgccatccgtgggggcattgccaagctccatgctacc
gctcagcttaatggcaataaggtattggtaatcccgcaggcacatagaatgactgagccg
gctgccaatgcgctattgaaaacacttgaagaacccacagataatacctttctggtgtta
attaccgaccgcccgcaacaattgctggccacgatagtaagccgctgcgaaaagcacgta
atgccaccccctgatactgagcaggcgttaggctggttacgggagcagggagtggatgat
gccacccccgcactattacatgcttatggcgccgcgccgtttactttattacaggctcta
cgcgaagaaacaggtattgcttatcgcacgtttcgcgaaggactggatacattgttagcc
ggcggcaatgatgccgtaacactggccacgcagtggcaagatagtgcgccaagtatcgtc
ggctggctgcagcaatatgcccatgaacaatgtgtacagtatccgaacgcttcgtcattt
agtttatttgaagcatgtacgcaggcgaatcggatgttacagaacccgggcgtgaataaa
gttatgatcctcagttgtttattagccgaaataaagcaatctgtgtag
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