Salinimonas sediminis: D0Y50_08800
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Entry
D0Y50_08800 CDS
T05624
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
salm
Salinimonas sediminis
Pathway
salm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
salm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D0Y50_08800 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salm03019
]
D0Y50_08800 (pnp)
03016 Transfer RNA biogenesis [BR:
salm03016
]
D0Y50_08800 (pnp)
Enzymes [BR:
salm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
D0Y50_08800 (pnp)
Messenger RNA biogenesis [BR:
salm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
D0Y50_08800 (pnp)
Transfer RNA biogenesis [BR:
salm03016
]
Prokaryotic type
tRNA degradation factors
D0Y50_08800 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
KH_2
S1_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AXR08458
UniProt:
A0A346NSF1
LinkDB
All DBs
Position
1952832..1954952
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AA seq
706 aa
AA seq
DB search
MTPITKSFQYGQHTVTLETGVIARQATAAVMASMDDTSVLVTVVGKKEAKADQDFFPLTV
NYQEKTYAAGKIPGGFFKREGRPSEGETLTARLIDRPIRPLFPEGFKNEVQVVVTVMSAN
PEIPTDIVSLIGTSAALAISGIPFNGPIGAARVGYTNGEYILNTRVSEQAESQLDLVVAG
TQGAVLMVESEADVLSEDIMLGAVMFGHEQLQAVVSAVNEFASEVATPAWDWQPAAENTT
LKEKIKAAAQSGMTEAYQISDKLARKEAITAVNEKVVAEITAADENQDKKEILDLLHELE
SDVVRSRILSGEPRIDGRDPAMIRALDVATGILPRTHGSALFTRGETQAIVAATLGTERD
AQMIDELQGRRDSRFMLHYNFPPYCVGETGMIGSPKRREIGHGRLAKRGIQAVMPSEEEF
PYVVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKASVAGIAMGLVKSDDNFVVLSDI
LGDEDHLGDMDFKVAGTTGGITALQMDIKIEGITQEIMQIALKQAKEARLHILNVMDEAI
GGHREELSEYAPRIYTMKIDQDKIRDVIGKGGAMIRQITEESETNIEIEDDGTIKIFATE
RAKADIAISRIEQVTAEIEVGKTYHGKVTRIVDFGAFVEVLPGKEGLVHISQIAHERVNK
VTDYLSEAQMIDVKVMEIDRQNRVRLSIKELLEKPAPKSEGGEQGE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtgactcctattactaaatcatttcagtatggtcaacatactgtgactttggagaccggc
gtaattgcccgtcaggctaccgcagctgtaatggccagcatggacgacacgtccgtattg
gtaacggtagtgggtaaaaaagaagccaaagccgatcaggatttcttcccgttaacggtt
aactaccaagaaaaaacctatgccgcgggtaaaatcccaggcggttttttcaagcgtgag
ggacgtccttctgaaggcgaaacactgaccgcacgtctaatcgaccgtcctattcgtcca
ctgttccctgaagggttcaaaaacgaagtgcaggtagtagtaacggtcatgtcggctaac
cctgaaattccaactgatatcgtatcgttgattggtacgtcggccgcgttagcgatctca
ggtattccatttaatggtccaattggtgcagcgcgtgttggctacacaaatggcgaatac
attcttaatacccgtgtttctgaacaagctgaaagtcagcttgatctggttgtagccgga
acgcagggcgcggtattgatggttgagtcggaagcagatgtgctatctgaagacatcatg
ctgggtgctgttatgttcggtcacgagcaattacaagcagtcgtctctgcggtaaatgaa
tttgccagcgaagtggccactccagcatgggattggcagccagcagcagaaaacacaact
ttgaaagaaaaaatcaaagcagctgctcagtccggtatgacagaagcgtatcaaatctct
gataaactggcgcgtaaagaggcaattaccgcggtaaacgagaaagtggttgcggaaatt
accgccgctgatgaaaaccaggataagaaagaaattctggacttactgcatgagctggaa
agtgacgtagtacgttcacgtatcctgtcgggtgaacctcgtattgatggccgtgatcct
gcgatgattcgcgccctggacgtggcgacgggtattttaccacggacccacggttccgct
ctgtttacccgtggcgagacgcaagcaattgttgccgctactctgggtacggaacgcgat
gcacagatgattgatgagttgcaaggtcgtcgtgatagccgtttcatgttgcattacaac
ttccctccatactgtgtgggcgaaaccggtatgattggttcgccgaagcgtcgcgaaatc
ggccatggccgtcttgctaagcgtggcatccaggcagttatgccaagtgaagaagaattc
ccgtacgtagtgcgggtggtatctgaaatcactgaatcaaacggttcgtcgtcaatggct
tcggtttgcggtacctctctggcactaatggatgcgggtgtaccaattaaagcctcggta
gcgggtattgctatgggtctggtgaaaagcgatgataatttcgttgtgttatcagatatt
ctgggtgatgaagatcatctgggcgatatggactttaaagtggccggtaccacgggtggt
attactgcactgcaaatggatatcaaaatcgagggtatcacgcaggaaattatgcagatc
gcccttaaacaggcaaaagaggcccgtttacatatcctgaatgtgatggacgaagccatt
ggcggccaccgtgaagagctaagtgaatacgccccacgtatctacaccatgaaaatcgat
caggacaagatccgcgatgttattggtaaaggtggcgcgatgattcgtcagattaccgaa
gagtctgaaacgaacatcgaaattgaagacgatggtactatcaaaatcttcgccactgaa
cgtgctaaagcggatatcgccattagtcggatagagcaggttactgcagaaatcgaggta
ggtaaaacctatcacggtaaagttacccgtatcgttgattttggtgcatttgtagaagta
ttaccaggtaaagaaggcctggtgcatatctctcaaatcgcccatgagcgggttaacaaa
gtaaccgattatttgtcagaagcgcaaatgattgatgttaaagtaatggaaattgatcgt
cagaaccgcgtgcgtctgagcatcaaagaattacttgaaaagcctgcccctaaatctgaa
ggtggcgaacaaggcgagtaa
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