Salinimonas sediminis: D0Y50_08885
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Entry
D0Y50_08885 CDS
T05624
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
salm
Salinimonas sediminis
Brite
KEGG Orthology (KO) [BR:
salm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
salm03009
]
D0Y50_08885 (rimO)
Enzymes [BR:
salm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
D0Y50_08885 (rimO)
Ribosome biogenesis [BR:
salm03009
]
Prokaryotic type
ribosomal protein modification factors
D0Y50_08885 (rimO)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AXR06470
UniProt:
A0A346NLR3
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All DBs
Position
complement(1974796..1976256)
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AA seq
486 aa
AA seq
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MTVEKYTPNQTTTLSGPADVLRSQQSDTAMTDHQSPRIGFVSLGCPKNLVDSERILTQLR
TEGYDVVPTYNDADLVIVNTCGFIDAAVEESLDTIGEALKENGRVIVTGCLGIKDDEIRE
VHPNVLAVTGPHAYEEVVNQVHTHLPKPAHNPFADLVPDHGIKLTPRHFAYLKISEGCNH
RCTFCIIPSMRGDLVSRPVGEILDEAKRLKAGGVNELLVISQDTSAYGVDVKHQTGFWDG
MPVKTHLKQLCQKLGGMDMWVRLHYVYPYPHVDDLIPLMNEGKILPYLDIPLQHANKRIL
RLMKRPGSADRTLERIRKWREICPELIIRSTFIVGFPGETEEEFEELLTFIREARLDRVG
CFMYSPVEGAKANELADPVPEEIKQARHQRFMEIQESISAQKLQERIGKEYLIVIDSVDA
EGATGRTFADAPEVDGIVHLNGVYDVKPGQRVWAEIIHADNHDTWAVPVEDELEEEADSA
HSAVME
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgacagtagagaaatacaccccaaaccaaaccaccacattaagtggtcccgctgacgta
cttagaagtcagcaatctgacactgctatgacggaccaccaaagtcccagaattggcttt
gttagcttgggctgccctaaaaacctggtcgattcagagcgtattttaacgcagttgcgc
actgaaggttatgatgtggtccccacctataacgatgctgatttggtaatcgttaatacc
tgtggttttattgatgcggcggtagaagagtcgctcgatactattggcgaagccctgaaa
gaaaacggccgggttattgtcaccggttgtctgggcatcaaagatgacgaaatacgtgag
gtccaccccaacgtcctggcggtaaccggcccgcacgcttatgaggaagtggtaaatcag
gtacatacccacttgcccaaaccggcgcacaatccgtttgccgacttggtgcctgaccat
ggaatcaagcttaccccacgccattttgcttaccttaaaatttcagaaggctgcaaccat
cgttgtacattttgtatcatcccctcgatgcgcggcgatttagttagccgtccagtcgga
gaaattctggatgaagcgaaacggctgaaggcaggtggagtcaatgaactgttggttatt
tcgcaggataccagtgcttatggcgttgatgttaagcatcaaaccgggttctgggatggg
atgccggtaaaaacgcatcttaagcagttatgccagaagctggggggcatggatatgtgg
gttcgcttgcattatgtatatccatacccgcatgtggacgacctgattccattgatgaat
gaaggcaaaatactgccctacctggatattccattacagcacgccaataaacgtatcctt
cgcttaatgaagcggccaggtagtgctgatcggacgcttgaacgaattcgcaaatggcgg
gaaatctgtcctgagctgatcattcgctcaacgttcatagtaggtttcccaggggaaacc
gaagaagagtttgaagagttactgacctttattcgtgaagcacggctggaccgtgtaggc
tgttttatgtattcaccggtagagggagccaaagcaaatgaattggcagaccccgtacca
gaggaaattaaacaggcgcgccatcaacgattcatggaaatccaggaaagtatcagtgcc
cagaaactacaagagcggattggtaaagaatacttgattgtgattgacagcgttgatgct
gaaggggctaccggacgcacttttgctgatgccccggaggtagatggtattgttcaccta
aacggtgtgtatgacgttaaacccggtcaacgggtgtgggcagaaataatccatgccgac
aatcacgatacctgggctgttcctgttgaagatgaactcgaagaggaagctgattctgcc
cacagcgccgtgatggaatag
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