Salinimonas sediminis: D0Y50_11405
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Entry
D0Y50_11405 CDS
T05624
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
salm
Salinimonas sediminis
Brite
KEGG Orthology (KO) [BR:
salm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
salm03016
]
D0Y50_11405 (truB)
Enzymes [BR:
salm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
D0Y50_11405 (truB)
Transfer RNA biogenesis [BR:
salm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
D0Y50_11405 (truB)
Prokaryotic type
D0Y50_11405 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
vATP-synt_AC39
Motif
Other DBs
NCBI-ProteinID:
AXR06909
UniProt:
A0A346NN02
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All DBs
Position
complement(2548837..2549811)
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AA seq
324 aa
AA seq
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MAKRRKGRPVNGIVLLDKPVGGSSNQLLQKVRWLFQAQKAGHTGALDPLASGMLPICLGE
ATKFSQFLLEAEKAYEVTAHLGVRTTTCDADGEVVERKAVTVTEAAVTQACMSFLGKSKQ
IPSMFSALKYQGKPLYQYARQGIEVEREPRDIEIFELEIIRMALPDVELRVKCSKGTYIR
SLVDDIGQQLGCGAYVTRLHRTEVADYPTAKMVTLEQIEQLRGAEDNPDLASLDALLVPM
ETAVARLPVVFVDSAQRKRFESGQSVVDMQGISPVAGQAYQVRTLEADEQFLGVGEGVVA
PMDQPSARGSDRVFVSPKRRVVLD
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacgtcgtaagggccgcccagtcaatggtattgttctattagacaaaccggtg
ggtggctcgtcaaaccaattactacaaaaggtgcgctggttattccaggcccaaaaagct
ggccataccggggccctggaccctctggctagtggaatgctgcctatctgtttaggcgaa
gcaaccaaattttcgcagtttttgcttgaagcagaaaaagcctacgaggttactgcacat
ttgggggtgcgtaccactacctgtgatgctgacggcgaagtggttgaacgcaaagctgtt
actgtaacagaagcggcggtgacccaggcgtgtatgagctttttaggtaagagtaagcag
atcccctcaatgttttctgcacttaaatatcagggcaaaccgctgtatcaatatgcccgg
cagggcattgaagtagagcgagaaccgcgcgacatcgaaatatttgagctggaaattatc
cgtatggcgctgcccgatgttgagcttagggtgaaatgcagtaagggcacttacattcgt
tcattagtggacgatattggccaacaactaggttgtggcgcctatgttacgcggttgcat
cgtaccgaagtggcggattatcctactgcaaaaatggtgacgctagaacagatagagcag
ttaagaggggcagaggataaccccgatttagcttcgctggatgctttattggtacctatg
gaaacagcagtggcccgcttaccggttgtatttgttgattcggcccagcgcaaacgcttt
gaaagcggccaaagcgtggtagacatgcaaggaatcagcccggtagccggacaggcttat
caggtacgtactctggaggctgatgaacagtttctaggggtaggcgaaggggtagtggcg
cccatggaccagccttccgccagaggctccgatagggtgtttgtcagtcctaaaagacgg
gtggtgctcgattaa
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