Salinimonas sediminis: D0Y50_11600
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Entry
D0Y50_11600 CDS
T05624
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
salm
Salinimonas sediminis
Pathway
salm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
salm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D0Y50_11600 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salm03400
]
D0Y50_11600 (recC)
Enzymes [BR:
salm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
D0Y50_11600 (recC)
DNA repair and recombination proteins [BR:
salm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D0Y50_11600 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AXR06939
UniProt:
A0A346NN32
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All DBs
Position
complement(2593071..2596346)
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AA seq
1091 aa
AA seq
DB search
MLALYPSNKLEHLSYLLGALIQQQPGPPLQAETILVESPGMQHWLNMELARQQRVAMNLN
FPLPTRFMWEMARTVLGEDKVPRQSVYRREVLVWRIEKLIQHSDFCNLPEAAPVCRYWQT
IQDVDEQAVQRLQFATALADVFEQYQLYRPEWLFAWEQQQTVLPENSDELWQAAIWRMLV
AQAPLHPARLHKEAVETLHHNGCDALPERIIVFAINTMAPQLVQFFDALAVHTDIHIFHL
NPSVSYWGDTKSDRERARLLRQQGIEQWQLEQQDNPLLANLGQQGRDLFNLLTELDTFEV
SAFDTDPPPQPEQGPSLLQQMQQDILYASRPDTDFVTAPDDTSVQLVKAHSPLREVQALH
DTLLYLMQRDPDLAPGDIVVMCPAIEDYAPLIDAVFHRVGTPATQRTNPPRIVCSIADRS
PLDAEPLIAAFLSLLSLPDSRFEVSRIMDYLRLDAMRSKFELHSEDLDLMQFWLEQAHIH
WGLDGAHKRQVTRQVDDSDTFSWYWGLERLLTGMALGDSPQLHDGMLSVPHVEGSNAVTL
GRLIGLVGQLKHYANLLNQPRTAADWHLFLMQMREDCFAPDFDKIDIWESISNATSGLAD
QCAEALYDGLLSLRQVKEVLVKRFSSPDAGNHFLTGQVTFCSMLPMRSIPFKVVCVLGLN
DTEFPRQSQPISIDLMASAGRKIGDRSRRLEDRYLFLEALISARSQLYLSYQANSAQDNS
ERQPSLVLTELLEVLKRYQFSDAQTHHLALHPFSVAGFISSRPGFETGWLRLANAIAHHD
QAPKGSFTPLAEVQLPDMVSPAAMARALTHPLRYFANHQLGLYLDSAQPLLNDAEPFAAD
NLTRFQTLDALNEARAQQADPQVILQHAELDGQLPATPLGKTLLQNWDAASVLIMTKAMQ
PEPSGQEQHWYFGQSQLSTKGWYNGNDLVSWHSGAQTTSRQLQQFITLLMFNAAGIQTNL
HTYFCKWEKGEPVLRMATLTGHEPDAADSLLTRLAEAFTQLHSQPVLLMADAAITLLKKA
GSTPLTEWAAQPEAAFEWQKLWDGNVMSAGLKEDAYLHWFFPQGIALQDLPLAHFETLYR
PLLDCYKEKKA
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgcactctatccttcaaacaagcttgaacacttaagttatctgctcggcgcgctg
attcaacagcagcctgggccgccgctgcaggcagaaacgattctggtagaaagcccgggt
atgcagcattggctgaatatggagctagcgcgccagcaacgggtggcgatgaatctgaat
tttccgctaccgacgcggtttatgtgggaaatggcccggaccgtgttaggcgaagacaaa
gtacccaggcagtcggtttaccgccgtgaggtactggtctggcgcattgaaaagctgata
caacacagtgatttttgcaacctaccggaagcggcacccgtttgccgttactggcagaca
attcaggatgtcgatgaacaagccgttcaacgccttcagtttgccacggcgctggcagat
gtatttgagcagtatcaactctatcggccagagtggctgttcgcctgggaacaacagcaa
acggtattaccagaaaatagcgacgagctatggcaagccgccatctggcggatgctggtg
gcccaggctcctttgcatcctgcgcgcctgcataaagaagctgtcgaaacgctgcatcat
aacggatgtgacgctctgcctgagcgcatcattgtctttgcgatcaatactatggcgcca
caattggtgcagttttttgatgcgctggcggtacataccgatatccatatttttcatctt
aaccccagtgtatcttattggggcgataccaaaagcgatcgtgagcgcgcccgattatta
cgccagcagggtattgagcagtggcagctggaacaacaagataatccactgctagccaat
ctggggcagcaaggccgggatttattcaatcttcttactgaactggatacatttgaagtc
agtgcctttgacaccgacccacccccacaacctgaacaggggccctcgctgttgcaacaa
atgcagcaggatattttgtatgcaagtcgcccggataccgacttcgtcacggcgccggac
gataccagtgtgcaactggtcaaggctcatagcccgctacgtgaagtacaggcattgcac
gatacgttattgtatttaatgcaacgcgatcccgacctggcaccgggcgatatagtggtg
atgtgcccggccatagaagactatgcgccattgattgatgcggtgtttcaccgggtaggt
acgccggccacccagcgcaccaatcctccccgtatagtgtgttccattgccgaccgctcg
cccttagatgcagaacccttgattgcggcttttttaagcttactgagcctgcccgatagc
cgttttgaggtaagccggattatggattacctacggcttgatgcgatgcgcagtaagttc
gaattgcattctgaagatttggatcttatgcaattctggttagagcaagcacatattcat
tggggattggatggggcgcacaagcgtcaggtaacgcgccaagtggatgattcagacacg
ttcagctggtactggggattggagcggctattaaccggtatggcgctgggcgatagccca
caattgcacgatgggatgcttagtgtaccccacgtggagggaagcaacgccgtgaccctt
ggccgccttattgggttggtggggcagttaaagcattatgcgaacctgttaaaccagccc
cgtaccgccgcggactggcacttgtttttgatgcaaatgcgcgaagactgttttgcgccc
gattttgacaaaatagatatatgggaaagcattagtaacgcaaccagtgggttggcagac
caatgcgcggaagcgctatatgacgggttgctaagtttgcgccaggtcaaagaagttctg
gtgaagcgtttttcctccccagatgccggcaatcatttcttaaccggccaggtgactttc
tgttccatgctgcccatgcgcagtattccgtttaaagtggtatgtgtacttggcttaaat
gacacagagtttccccgccagtctcaacctatcagtattgatttgatggccagcgctggg
cgtaaaatcggcgaccgctcacgccggttggaagaccgctatttattcttagaggcgctg
atctcggcgcgtagtcagttgtatttgagttatcaggcgaacagtgcccaggacaacagc
gaaagacagccctcgttggtgctcaccgaattgctggaagtattaaagcgctatcaattt
tccgatgctcaaactcatcacctggcccttcatccgtttagcgttgctggctttattagc
tcgcggccgggctttgaaaccggctggttacgcctggctaatgcgatagcccaccacgac
caagcgccaaaggggagttttacgcctttagccgaggtccagttgccggacatggttagt
cctgcggccatggcccgcgcgctcacccatccgttgcgttattttgctaaccaccaatta
ggcctctatctagacagtgcgcagcccttattaaatgacgctgaaccgttcgccgccgat
aatttgacccgctttcaaactctcgatgcgttaaacgaggcgcgggcgcaacaggcggat
ccgcaagtgatattgcagcatgctgaacttgacggtcagctaccggctaccccgctgggg
aaaacactgttgcagaactgggatgccgcttctgttttaattatgactaaagcgatgcaa
cctgaacccagcggacaggagcaacactggtactttggccaaagccagctaagtaccaag
ggttggtacaatggcaatgatctggtgagctggcatagcggcgcgcaaacgacctcccgt
cagcttcaacaattcataaccttactgatgttcaatgcggctggcatacaaaccaatctg
catacgtatttttgtaaatgggaaaaaggcgagccggtgttacgtatggctacgttaacc
ggccatgagccagatgcagcggatagcctgctgacgcgtttggccgaggcttttacccag
ttacatagtcagccggtgctactgatggctgatgccgctataacattattaaaaaaagca
ggcagcacaccgctgaccgagtgggccgctcagcccgaagctgcgtttgaatggcagaag
ctatgggatggcaacgtgatgagcgccggcttaaaagaagatgcctatctacattggttt
ttcccccagggcattgctttgcaagatttgccgttagcgcactttgaaacactttaccgg
cccttgctggactgctacaaagagaaaaaagcatga
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