Salinimonas sediminis: D0Y50_11610
Help
Entry
D0Y50_11610 CDS
T05624
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
salm
Salinimonas sediminis
Pathway
salm00061
Fatty acid biosynthesis
salm00071
Fatty acid degradation
salm01100
Metabolic pathways
salm01212
Fatty acid metabolism
salm02024
Quorum sensing
salm04146
Peroxisome
Module
salm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
salm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
D0Y50_11610
00071 Fatty acid degradation
D0Y50_11610
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
D0Y50_11610
09145 Cellular community - prokaryotes
02024 Quorum sensing
D0Y50_11610
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
salm01004
]
D0Y50_11610
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salm04147
]
D0Y50_11610
Enzymes [BR:
salm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
D0Y50_11610
Lipid biosynthesis proteins [BR:
salm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
D0Y50_11610
Exosome [BR:
salm04147
]
Exosomal proteins
Exosomal proteins of breast milk
D0Y50_11610
Exosomal proteins of breast cancer cells
D0Y50_11610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AXR06941
UniProt:
A0A346NN34
LinkDB
All DBs
Position
complement(2597718..2599391)
Genome browser
AA seq
557 aa
AA seq
DB search
MPLDFTATDVSAVTESPLSMLYKWEASRGDEPFLHQPRAGGVETYTWKQVADQARRVAAR
LNQMAYAPGSRIAIFAKNCAEWFIADLGIMMAGHVSVPIFGSAGESTIQYVLQHADVKLM
LVGKLDNREAQLAAIPADCHTVYFPYPDLTGTQSWADFISCDPINDSPLPNLDAMMTIIY
TSGSTGQPKGVVHTYRTACWAAQNSLSSLTLNQHDRLLSYLPLAHITERVLVELAAFYGG
PQIFFVESLDTFSRDVHHCQPTLFISVPRLWTKFQMGVLAKMPQKKLNVLLSIPIIKGVV
SRKIRQGLGLDQARFWASGSAPLAPAIIRWFHRIGIDISEGWGMTENSAYGSASVPFRED
KIGCIGKAYDGVDIRLSDEGEIQVKSPCNMVEYYLEPEKTADTYTADGYLKTGDKGQMDD
EGYIRITGRLKDIFKTEKGKYVTPSPIEAALMVNSLIEQVCVTGTNLPQPVGLLVLSEPA
EALDEATIRQKLITTLDKVNSKLESHQKLDHLIVVNEPWTIENNLLTPTLKVKRHVLEEH
YDAIIHAQYDQPVVFKA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcccctggatttcaccgcaacagatgtatcggctgtgaccgaatcaccgctctccatg
ctatacaaatgggaagcatcgagaggtgacgagccgtttttgcaccagcctagagccggc
ggcgttgaaacctatacctggaaacaggtggctgatcaggcccgccgagtggccgccagg
ttaaaccaaatggcctacgcgccgggtagtagaattgctatctttgctaaaaactgtgcg
gaatggtttattgcggatttggggatcatgatggccgggcatgtgtccgtaccaattttt
ggttctgctggcgaaagcacgattcagtatgtcttacagcatgcagacgttaagctcatg
ttggtgggcaaactggataatcgggaggctcagctggcagctattccagccgattgtcat
accgtttattttccttatccagacctgaccggcacccaaagctgggccgactttataagt
tgcgatcctattaacgacagtccgctgcctaaccttgatgccatgatgacgattatttat
acctctggcagtaccggccagcccaaaggggtggtacatacctaccgcaccgcatgctgg
gcagcacagaattcgttaagttcgctgacgctgaatcaacatgacaggttgctaagttat
ctgccattagcccacattaccgaacgagtactggtggaactggcggcgttttatggcggc
ccgcaaattttctttgtcgagtccctcgatacattttcccgcgatgtccatcattgccag
cctacactattcatttccgtgccccgtttgtggaccaaattccagatgggagtattggca
aaaatgccccaaaagaaactcaatgttttgcttagcattccaattattaagggcgtggtg
tcacgtaaaattcggcagggcctggggctggatcaggcgcgtttttgggccagtggttcg
gcgcccttggcgccagcgattattcgctggtttcaccgaattggtattgatatatcagaa
ggttggggaatgaccgaaaatagtgcatatggcagcgccagcgtgccgtttcgcgaagat
aaaattggttgtattggtaaagcgtatgatggcgtggatattcggttgtctgacgagggc
gagattcaggtgaagtcaccttgtaatatggttgaatattacctggaaccagaaaaaacg
gcagatacttacaccgctgatggctaccttaaaacgggcgacaaaggacaaatggacgat
gaaggctatattcgcattaccggccgcctaaaagatatttttaaaactgaaaaaggtaaa
tatgttacgccttcgcctattgaagctgcgcttatggttaactcattgattgagcaggta
tgcgtaacgggcaccaatctgccgcaacccgttggtttacttgtgctaagcgagccagct
gaggcgctggatgaagcgacaattagacaaaagcttataaccacgctggataaagtaaac
agcaaactggaaagccatcaaaagcttgatcatttaattgtggtgaatgagccctggact
atcgaaaacaacttactcacccccacattgaaggttaagcggcatgttttagaagagcac
tatgatgccattattcatgctcaatatgatcagccggtggtttttaaagcgtag
DBGET
integrated database retrieval system
