Salinimonas sediminis: D0Y50_14220
Help
Entry
D0Y50_14220 CDS
T05624
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
salm
Salinimonas sediminis
Brite
KEGG Orthology (KO) [BR:
salm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salm03400
]
D0Y50_14220
DNA repair and recombination proteins [BR:
salm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D0Y50_14220
Archaeal homologous recombinant proteins
D0Y50_14220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
Polysacc_lyase
Fez1
AAA_21
TelK_muzzle
ABC_tran
nSTAND3
cobW
Motif
Other DBs
NCBI-ProteinID:
AXR07404
UniProt:
A0A346NPE7
LinkDB
All DBs
Position
complement(3218033..3221080)
Genome browser
AA seq
1015 aa
AA seq
DB search
MKPLNLKMQAFGPFAGSQTIDFTQLGSNPLFLINGPTGSGKTSILDALCYALYGETTGNE
RDGAQMRCELAAAELATEVVLEFSLHQQRYRVARSPEQQVPKARGEGFTLSKHKASLYRI
TEADTLLTSKTSEVKAQITTLIGLSETQFRQVMVLPQGKFRELLLASSKEREDIFGQLFQ
TDIYKQIEYALKEQAAQISKSKNEFDNQIRGALQVAGETDEKALQAAVNQQAVALEQARV
AEQQAASTVQQLRARLQQAQTLNAQFSRKAQAQASLHAHLQSEDSINQQATLLESALDAR
RIRNHYDQWQQSAQQQHALTDKVSQLQQQLDAAKTQHHTAEEALGQARQRAEQIDSLTAQ
QYQLEQVKQQLQERQATAQHIKRCEAAQLTHQQNLDKYQHVRQALEDKTTQATQALEQAR
QETARLGEVNGQIHQSERLIKDARRLTELDTRIAQCTKQTMASQQQTEDSAAQSQSAGRQ
ADQLELHWHSSQAAALAAKLESAQPCPVCGSQEHPAPASFTGDPVSRVQVQKARQQAQQL
ADKASAAHSTLAQHRHELAQLKQQYTELADEIGEQGTCSLADLQQQLTDLQARLASIKAI
DLTTLEDSLTALKQRCKNGDATISELRDTQVTNNTELVQYQQQYHALSKKIASEYQDDAA
VDAQIAQVKAQISEMNQAVQHAMDNEQQAVRALSQYQGELASSQQYLTQATAQAKQAEET
WQQTLDASRFATQQAFTEALAHEPHIDQWQQHIADYQQTRLKLAQTVQDLEAALQQQSPP
DISAISAQLATTEQQHAQLRDTLDNTHALYQRLHKAATDISALHTKNRELEQAYRIYGTL
YDVTSGKTGSRISLHRFVLGVLLDDVLIQASGRLSLMSKGRYRLVRKTAGFKGAAGRGLD
LSVEDSYTSGTRDVATLSGGESFMAALALALGLSDVVQSYSGGIRLDTLFIDEGFGSLDP
ESLDLAVQTLVDLQQHGRMIGVISHVSELKEQMAQRIDVQPSRHGSTVSVIGTMS
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgcttaacctgaagatgcaggcgttcgggccgtttgctggcagccagaccatc
gattttacccaattaggtagtaacccgctgtttctaattaatgggccgacggggtcgggt
aaaacctctattttagatgctttatgttatgccctttatggtgaaaccaccggcaatgaa
cgtgacggtgcgcagatgcggtgcgagctggctgctgcagagctggcgaccgaagttgtg
ctggagttttcgctgcatcaacaacgttaccgggtggcccgttcacccgagcaacaagtg
cccaaagcgcggggcgaagggtttacgctaagcaaacacaaagccagtttatatcgaatc
accgaagcagacaccttgctgaccagcaaaaccagtgaggtaaaagctcagatcactact
cttattggtttaagcgaaacccagtttcggcaggtgatggtattgccccagggcaagttt
cgcgagctgttactggccagttcaaaagaacgtgaagatatttttggacagctatttcaa
accgatatatataaacaaattgaatatgcgttaaaagaacaagccgcccagataagcaaa
tccaagaacgagtttgataaccaaattcgcggcgctttacaagtggctggcgaaacagat
gaaaaagccctgcaagccgcggtgaatcagcaagctgtggccctggaacaggcccgggtg
gcagagcagcaggccgccagcaccgtacagcagttacgcgcccgtttacagcaagcgcaa
acccttaatgcgcagtttagtcgcaaagcgcaagcccaggcctcgcttcacgcccattta
caaagtgaagacagcatcaaccagcaggctaccttactggaaagtgcgcttgatgcccgg
cgtattcgcaaccactatgatcaatggcagcaaagtgcgcaacaacaacacgcgctaacg
gataaagtcagccagctgcaacaacagctcgacgcggctaaaacgcagcaccatactgct
gaagaagccttagggcaggctcgccagcgcgcggaacaaattgacagcttaaccgcgcaa
caatatcagttagagcaagttaagcagcaattgcaggaacgccaggccaccgcgcaacat
attaagcgctgtgaagcggcccaacttacccatcagcaaaacctggataaataccaacac
gtcagacaggccctggaagacaaaaccacccaggcaacccaggccctggaacaggcccgc
caggagaccgcccggctgggggaagtaaacggccaaattcaccaaagcgaacgactgatt
aaagacgcacgccgcttaactgagctggatacgcggatagcccagtgtactaaacagacc
atggccagccagcaacagacagaggatagcgcggcgcaaagccagagtgcgggccggcag
gcggaccagctggagctgcactggcacagtagccaggcggcggcattggcggcaaaactg
gaatcggcacaaccatgcccggtatgtggtagccaggaacacccggcaccggccagtttt
accggtgatccggtgagtcgcgtgcaggtgcaaaaagccagacagcaggctcagcagtta
gccgacaaagccagtgccgcgcatagtacgttagcgcaacatcggcacgaattagcgcag
ctcaagcagcagtacaccgaactggccgatgaaataggcgaacagggcacctgctcatta
gccgatttacagcaacagctgactgacttgcaagcacggctagccagtataaaagcaata
gacttaactacgctggaggacagtcttactgcgctaaaacagcgttgcaaaaacggtgac
gccactatcagtgaactgcgtgatacccaggtgactaacaatacagaactggtccagtat
cagcagcaataccatgcattaagtaaaaaaatcgccagtgaataccaggatgatgccgcc
gtcgatgcgcaaatagcacaggtcaaagcccagataagcgagatgaaccaagctgtccaa
cacgcaatggataacgagcaacaggctgtccgggctctatcgcaataccagggagaattg
gcaagtagccaacagtatctgactcaggccaccgctcaggctaagcaggctgaagaaacc
tggcagcaaacactcgatgccagccggtttgctacccagcaagcatttaccgaggcgctg
gcccacgagccgcacattgaccaatggcaacagcacattgccgactatcagcaaacccgg
cttaaattagcgcaaaccgtgcaggaccttgaagcggcgctacagcagcaaagcccgcca
gacattagcgctatctcggcgcagcttgcaaccacagagcaacagcatgcccagctacgt
gatacgttagataatacccatgccctgtatcaacgtttgcacaaagcggcaaccgatatt
agcgccttacatactaaaaaccgcgagctggaacaggcctaccggatttatggcacgctg
tatgatgtcacgagcggaaaaaccggcagccggataagtttgcaccggtttgtgttaggg
gtattgctggatgatgtacttattcaggcctccggacgattgagcctgatgagcaaaggc
cgctaccggctggtacgtaaaaccgcagggtttaaaggcgcggcggggcggggattagac
ttgtcggtagaagacagctataccagcggcacccgggatgtggcgacgttatccggcggc
gagtcatttatggctgcgttggcgctggcattgggcttgtcggatgtggtgcagtcgtac
agcggcgggatccggttggatacgttatttattgacgaaggttttggcagcctggaccct
gaatcgctggatttagccgtacagacattggttgacctgcaacaacatgggcgcatgatt
ggcgttatttcccatgtatcggagctaaaagagcagatggcacagcgcatcgatgtacag
ccttcacggcatgggtcaacggtatcggttatcggcaccatgagctaa
DBGET
integrated database retrieval system
