Salinimonas sediminis: D0Y50_16420
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Entry
D0Y50_16420 CDS
T05624
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
salm
Salinimonas sediminis
Pathway
salm03030
DNA replication
salm03430
Mismatch repair
salm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
salm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D0Y50_16420
03430 Mismatch repair
D0Y50_16420
03440 Homologous recombination
D0Y50_16420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salm03032
]
D0Y50_16420
03400 DNA repair and recombination proteins [BR:
salm03400
]
D0Y50_16420
Enzymes [BR:
salm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D0Y50_16420
DNA replication proteins [BR:
salm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D0Y50_16420
DNA repair and recombination proteins [BR:
salm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D0Y50_16420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AXR07806
UniProt:
A0A346NQJ9
LinkDB
All DBs
Position
complement(3744501..3745190)
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AA seq
229 aa
AA seq
DB search
MNQWGHLLRQWLGLSSVIPQAMLTSPLRQIDMLAVDVELTSLTLATAGVTSVGWIAGKGA
TIALDSAFYAPVSDAQDLAQSPVIHGLTAPQLHTGKPLKQVYRQLVPLLRSHVVICHNSA
LDVGILAKVGSKLGLAPLTITAIDTMLLEKYFLEKHTSVIPANALTLAHCRQRYHLSPAP
QHHALDDALATYQLWLAQAHQLNCTKKTQLGDLLHTGAVVSRKIENKSR
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaatggggccatcttttacgccaatggcttgggctatcctcagtgataccccaa
gccatgttaacgtcaccattgaggcaaatagatatgctcgctgtggatgttgaacttacc
agcctgaccttggcgaccgccggggtcacatcggtaggctggatagcggggaagggggct
actatagcgctggactcggctttttacgcgccggtgagtgatgcgcaggacctggcgcaa
agcccggtaatacatggccttactgcgccgcaattgcatacgggcaaaccgcttaagcag
gtatataggcaattggtccctctgcttcgaagccatgttgtgatatgccataacagtgcg
ctggatgtaggtattctggcaaaggtgggaagcaagcttggcctggcgcctttgactatt
accgccatcgacacaatgttgctagaaaaatactttcttgaaaagcacaccagcgtgata
cctgcaaatgcgttaaccctggcgcactgccggcagcgttatcaccttagcccggcgccc
caacaccacgctctggatgatgccctggcaacttatcaattatggttggcccaggctcat
cagctaaattgtactaaaaaaacacaattgggcgatttgctgcacacaggggcagtggtg
agcagaaaaattgaaaataaatcgcgttag
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