Salinimonas sediminis: D0Y50_16705
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Entry
D0Y50_16705 CDS
T05624
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
salm
Salinimonas sediminis
Pathway
salm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
salm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
D0Y50_16705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salm03021
]
D0Y50_16705
03400 DNA repair and recombination proteins [BR:
salm03400
]
D0Y50_16705
Enzymes [BR:
salm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
D0Y50_16705
Transcription machinery [BR:
salm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
D0Y50_16705
DNA repair and recombination proteins [BR:
salm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
D0Y50_16705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AXR07853
UniProt:
A0A346NQP6
LinkDB
All DBs
Position
complement(3809627..3810616)
Genome browser
AA seq
329 aa
AA seq
DB search
MVGSVTEFLKPRLVEIENVSPTRAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDVIEILLNLKGLAVRLEGKDEATLTIVKSGAGPVVAGDIQHDGD
VEITNPEHVICTLTGEAEISMRIKVEMGRGYVPASTRRSSEDDDRPIGRLLVDASFSPVE
RIAYTVESARVEQRTDLDKLIIDMETNGTLDPEEAIRRAATILAEQLDAFVDLRDVSEPV
QKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIQYIGDLVQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPESIADKD
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
attgtgggttctgtgactgaattcctaaaaccgagattagttgagatcgaaaacgtttct
cctactcgtgccaaagtaactttggaaccgctagagcgtggctttggccatactctgggt
aacgccctgcgtcgtattctgttgtcatccatgcctgggtgcgcagttaccgaggtagaa
atcgatggcgttttacacgagtacagcaccaaagaaggtgttcaggaagacgttatcgag
atcctgctaaatctgaaaggtttagcggttcgtcttgaaggcaaagacgaagcaacgctg
acgatagtgaagtctggcgctggccctgttgttgctggtgatatacagcatgatggtgat
gtagaaattacgaaccctgaacacgttatttgtactttgactggcgaagctgaaatcagc
atgcgtatcaaagtagaaatgggccgtggttatgttcctgcttctacccgtcgctcctca
gaagatgatgatcgtccaattggtcgtttgttagtagatgcctcattcagcccagttgaa
cgtattgcttacactgttgagtctgcccgtgttgaacaacgcacagacttagataagtta
atcatcgacatggaaacaaatggcaccctggatcctgaagaagcgatccgccgtgcagcc
actattttggctgaacagttagatgcctttgttgacttgcgtgacgtttcagagccagta
cagaaagaagagaagccggaatttgacccgattctacttcgtcctgtagatgacctggaa
ttgacagtacgttctgcaaactgtttgaaagcggaagctatccagtacattggtgacctg
gttcagcgtaccgaggtggaattgcttaagacacctaaccttggtaaaaaatcgctaact
gaaatcaaagacgtgttagcctctcgtggtctatctctgggtatgcgcctagaaaactgg
ccaccagagagcatcgctgacaaagattaa
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