Salinimonas sediminis: D0Y50_18440
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Entry
D0Y50_18440 CDS
T05624
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
salm
Salinimonas sediminis
Pathway
salm03420
Nucleotide excision repair
salm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
salm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D0Y50_18440
03430 Mismatch repair
D0Y50_18440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salm03400
]
D0Y50_18440
Enzymes [BR:
salm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D0Y50_18440
DNA repair and recombination proteins [BR:
salm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D0Y50_18440
MMR (mismatch excision repair)
Other MMR factors
D0Y50_18440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AXR08157
UniProt:
A0A346NRK0
LinkDB
All DBs
Position
4203149..4205320
Genome browser
AA seq
723 aa
AA seq
DB search
MDVSLLLDSLNDKQREAVAAPLSNMLVLAGAGSGKTRVLVHRIAWLMEVENITPFSILAV
TFTNKAAREMRGRIESLMGRGLNSMWIGTFHGLAHRLLRSHHAEAGLPENFQILDSDDQY
RLVRRILRAMNLDEKHWAPRQVQWYINGNKDEGLRPQHIETHGDATAQKMREIYTAYQEA
CDRSGLVDFAELLLRAHELWAKNPEVLAHYQRRFRAVLVDEFQDTNNIQYAWLRMLCSGN
TNNIMIVGDDDQSIYGWRGANVDNIHNFLKDFGDTSTIRLEQNYRSTGNILNAANAVIDN
NSGRLGKELWTEDSEGELISVYAGFNELDEARFIVSQIKSWIDDGNSLNDSAILYRNNAQ
SRVLEEALLHEGIAYRIYGGLRFFERQEIKDALGYLRMLNHPHDDAAFERVVNTPSRGIG
EKTITQVRAAAREQNCSLWQASNLLLTENSLTGRASKALQAFTTLVSELEQAVHGLPLEE
QADKAIRQSGLYAMYQAERGEKAQARLENLEELVTACKQFIVPEEAEEMTPMSAFLAHAS
LEAGDTQADSEQDAVQMMTIHSAKGLEFGLVFLAGVEEGMFPSQMTNDEPGRMEEERRLC
YVGMTRAMKKLFITYAESRRVYGQDKFHTASRFIREIPGEYVQEVRLKSQISRPVHNRFS
RMASHEAFEGSGFALGQRVEHPKFGEGVVLNYEGSGDHARVQVNFDDFGSKWLVMAYAKL
KAN
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatcgttactgctcgacagcttaaatgacaaacaacgtgaagcagtagcagcg
ccgctttcaaacatgcttgttctggctggcgccggtagtggtaaaacccgtgtattggtt
caccgaatagcttggttgatggaagtggaaaatattacgccattttctatcttggcggtt
actttcaccaataaggccgcacgcgaaatgcggggcagaattgaaagcctgatggggcgc
gggctcaatagcatgtggattggtacctttcatggcttagcgcaccgcctgctacgttcc
catcatgccgaggctgggttacctgaaaactttcaaattctggactcagacgatcagtat
cgcctggtccgccgtatattgcgcgctatgaatctggatgagaaacattgggcccctcgc
caggttcagtggtacatcaatggaaataaagatgaaggattacgccctcagcatattgaa
acccatggtgacgccaccgcccaaaaaatgcgtgaaatctacacagcttaccaggaagcc
tgcgaccgttccgggttagtcgattttgccgagctgttattgcgggcccatgagctgtgg
gcaaaaaaccctgaagtgctggctcattaccagcgccgctttcgggcggtattagtggat
gagtttcaagataccaataacattcagtacgcctggctgcgcatgttatgtagcggcaat
accaataatattatgattgtaggcgacgatgaccagtctatttacggttggcgcggcgcc
aatgtagataatatccataattttttgaaagacttcggtgacacatcaactatccgcctg
gaacagaattaccgttccaccggcaatatccttaatgcagccaatgcggttatcgacaat
aattccggtcgcttaggtaaagagctatggaccgaagatagcgaaggcgagcttatttcg
gtttatgcgggcttcaacgaacttgatgaagcccgctttattgtttcccagataaaaagc
tggatagatgacggaaatagcctgaacgacagtgccattttataccggaataacgcgcaa
tcacgggtattagaagaagcgttgctacatgagggtattgcttatcgcatttacggcggc
ctgcggttctttgaacgccaggaaataaaagacgcactgggctatctgcgtatgctgaac
cacccgcatgacgatgctgcttttgaacgggtagtgaataccccaagccggggcatcggc
gaaaaaaccataacccaggtacgggccgccgcccgtgagcaaaattgttcactatggcag
gccagtaacctgctgcttaccgagaatagcctgacggggcgggcgtctaaggcgctacaa
gcgtttaccacgctggtcagtgaactggaacaagcggtgcatggattgccgttggaagaa
caggccgacaaagccattcgccagtccggactatatgccatgtatcaggccgagcgcggt
gaaaaagcccaggcccgcctggaaaaccttgaagagctagtcactgcctgtaagcagttt
atcgtgcccgaagaagccgaagaaatgacacctatgagtgcatttttagcccacgcctcg
cttgaagccggagatacccaagccgactctgagcaggacgcggtgcagatgatgactatc
cacagtgcgaaaggcctggagtttgggctggtctttttagctggggtggaagaaggcatg
tttccctctcaaatgaccaatgatgaaccagggcgtatggaagaagagcgccggctttgt
tatgtgggcatgacccgggccatgaaaaaactgttcataacatacgcagaaagccgcaga
gtatacggtcaggacaaatttcatacggcatcgcggtttattcgcgaaattccgggcgaa
tatgttcaggaagtacgtcttaaaagccagatttcgcgcccggtgcataaccggtttagc
cgtatggcttcccatgaagcctttgaaggtagcggctttgccttaggtcagcgggttgag
catccaaagtttggtgaaggtgttgtactgaattatgaaggctctggggatcatgccagg
gtgcaggttaactttgatgacttcggttcaaaatggctagtgatggcctatgctaaacta
aaggctaattga
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