Salinisphaera sp. LB1: SALB1_0290
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Entry
SALB1_0290 CDS
T05476
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
saln
Salinisphaera sp. LB1
Brite
KEGG Orthology (KO) [BR:
saln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
saln03016
]
SALB1_0290
Enzymes [BR:
saln01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
SALB1_0290
Transfer RNA biogenesis [BR:
saln03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
SALB1_0290
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AWN14497
UniProt:
A0A2Z3J858
LinkDB
All DBs
Position
complement(322488..323030)
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AA seq
180 aa
AA seq
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MTAGDTSRSQRLFFALWPPPDAARRIAELGAALDAQGAPVARDKLHLTLAFHGNCDAAGR
EALIARAERVSAAPIDLVFDRLDGFSKPRLIWLGLSDPPQALFDLAAFLRGPGLDRRRFV
PHITLQRKAAPIAARSVAPIAWRAREFVLAESGAHGVAGAYRILARWPLAGEAGPLANVK
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgacggccggcgatacatcgagatcacagcgtctgttcttcgcgctctggccgccgccc
gatgcggcccggcgcatcgccgagctcggcgcggcactcgatgcccagggcgcgccggtg
gcccgcgacaagctgcatctcacgctcgccttccacggcaactgcgacgcggccgggcgc
gaggcgctgatcgcccgcgccgagcgtgtgtccgcagcgccgatcgacctcgtgttcgac
cgcctcgacggcttttccaaacctcgcctgatctggctcgggctttccgacccgccacag
gcgttgttcgatctcgcggcttttttgcgcggccccggtcttgatcggcggcgtttcgtg
ccgcatatcacattgcaacgaaaagccgcgccgatcgcggctcgttcggtcgcccccatc
gcctggcgggcgcgcgagttcgtgctggccgaaagcggggcgcacggcgtggccggcgct
tatcgcatacttgcgcgctggccgctcgcgggcgaggctgggcccctcgcaaatgtgaaa
taa
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