Salinisphaera sp. LB1: SALB1_0992
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Entry
SALB1_0992 CDS
T05476
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
saln
Salinisphaera sp. LB1
Pathway
saln03420
Nucleotide excision repair
saln03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
saln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SALB1_0992
03430 Mismatch repair
SALB1_0992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saln03400
]
SALB1_0992
Enzymes [BR:
saln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SALB1_0992
DNA repair and recombination proteins [BR:
saln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SALB1_0992
MMR (mismatch excision repair)
Other MMR factors
SALB1_0992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
MSSS
Motif
Other DBs
NCBI-ProteinID:
AWN15199
LinkDB
All DBs
Position
complement(1045316..1047487)
Genome browser
AA seq
723 aa
AA seq
DB search
MDDVSAILDGLNDAQREAVGAPPAHMRVLAGAGSGKTRVLIHRIAWLIGVEGVSPQSILA
VTFTNKAAGEMRARLEPMLRVPARAMWVGTFHGIAHRLLRLHYKEAKLPQTFQIIDSDDQ
LRLVKRAMRGLEIDEQRWPPRQMAGFINSCKEDAERPRDLADTGDYARSQMIRVYTAYEN
AREAAGLVDFPELLLRAYETCRDNADLLAHYRRRFSHLLVDEFQDTNALQYAWIRLLAGP
HGKVFIVGDDDQSIYSWRGARVDNILSFENDFAGTRTVRLEQNYRSTGTILAAANGLIGH
NLSRLGKELWTAGADGEPIDVYAAFNEYDEAQHVVTRIQNWIADGGARSDVAILYRSNAQ
SRVLEERLIAAEIPYRIYGGQKFFERAEIKDALAYLRLMQSRSDDAAFERVVNTPTRGIG
NTTVDKIRTHARAGAMNLWQAAYELADPDNKQGLPARAANAVLNFIRLIDELDASAEGMA
LHEATEHVIAVTDLKGHHGKGNDEKAEARKDNLDELVSAARAYTADDDETMDEITQFLAY
ASLEAGEAQAGEWDDSVQLMTLHAAKGLEFPLVFMVGMEEGLFPHQRSVADDNGLEEERR
LAYVGMTRAMEKLNLSHAEVRRLHGQENLAAPSRFLREIPSDYLRETRPQAGISQPVFRP
GPIGRNEGKSAGLGLGQRVMHKKFGEGTVLAFEGDGARARVQVNFDGAGSKWLIAGYAKL
DPI
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgtatccgcaatcctcgacggtctcaatgatgcccagcgcgaagcggtcggc
gcgccgccggcgcacatgcgcgtgctggccggcgccggctccggcaagacgcgtgtgctc
atccaccgcattgcctggctgatcggtgtggaaggggtctcgccgcagtcgatcctggcg
gtgaccttcaccaacaaggccgccggcgagatgcgcgcacgcctcgagccgatgctgcgc
gtgccggcccgcgccatgtgggtgggcacgttccacggtatcgcgcatcggctgctgcgc
ctgcactacaaggaagcgaagctgccgcagacgttccagatcatcgattcggacgatcag
ctgcgcctggtcaagcgcgccatgcgcggtctggagatcgacgaacagcgctggccgccg
cgccagatggccggcttcatcaacagctgcaaggaagacgccgagcgcccgcgagacctg
gccgataccggggattacgcccgatcccagatgatccgggtctataccgcctacgagaac
gcgcgcgaggcggccgggctggtggatttccccgagttgttgctacgtgcctacgagacc
tgccgcgacaacgccgacctgctggcccactatcgtcgccgtttttcgcatctgctggtc
gacgagttccaggataccaacgcgctgcagtacgcctggatccggctgctcgccggcccc
cacggcaaggtcttcatcgtcggcgacgacgatcagtcgatttattcctggcgcggtgcg
cgggtcgacaatattctcagtttcgagaacgacttcgccggcacccggaccgtgcgcctc
gagcagaattatcgctcgaccggcaccatcctggcggcggccaacgggctgatcgggcac
aatctgtcgcggctcggcaaggagctgtggactgccggcgccgacggtgagccgatcgat
gtctatgccgctttcaacgaatacgacgaggcccagcacgtcgtcacccgcatccagaac
tggatcgccgacggcggggcgcgttcggatgtggcgatcctgtatcgctccaacgcccag
tcgcgggtgctggaagagcgcctgatcgccgccgagatcccgtatcgcatctacggcggc
cagaagttcttcgagcgcgccgagatcaaggacgcgctggcctatctgcggctgatgcag
tcgcgctccgacgatgccgccttcgaacgggtggtgaacacgcccacccgcggcatcggc
aacaccacggtcgacaagatccgcacccacgcccgggccggcgccatgaatctctggcag
gcggcctacgaactggcggaccccgataacaaacagggcctgccggcgcgcgccgccaac
gccgtactgaacttcatccggctcatcgacgaactcgatgccagcgccgagggcatggca
ttgcacgaggccaccgagcacgtcatcgcggttaccgatctcaagggtcatcacggcaag
ggcaacgacgaaaaggccgaggcccgcaaggacaacctcgacgaactggtttccgccgcc
cgtgcgtataccgcggacgacgacgagaccatggacgagatcacccagttcctggcctat
gcctcgctggaagccggcgaggcccaggccggcgagtgggatgattcggtccagctgatg
acgctgcatgccgccaaggggctggaattcccgctggtgttcatggtcggcatggaagaa
ggactgtttccgcaccagcgctcggtcgcggacgacaatggcctggaggaagagcgccgg
ctggcttatgtcggcatgacccgggcaatggaaaagctcaatctctcgcacgccgaagta
cgccggctgcacggccaggagaatctggccgcgccgtcacgctttctgcgcgagatcccg
tccgattatctgcgcgaaacccgcccccaggccggcatctcccagccggtgttccggccc
ggcccgatcggccgcaacgaaggcaaatccgctgggctcgggctcggccagcgtgtcatg
cacaagaaatttggcgagggcaccgtactggccttcgagggcgacggcgcgcgggcccgg
gtccaggtcaacttcgatggcgccggcagtaaatggctgatcgccggttacgccaagctc
gatccgatctga
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