Salinisphaera sp. LB1: SALB1_2272
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Entry
SALB1_2272 CDS
T05476
Name
(GenBank) Exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
saln
Salinisphaera sp. LB1
Pathway
saln03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
saln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SALB1_2272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saln03400
]
SALB1_2272
Enzymes [BR:
saln01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
SALB1_2272
DNA repair and recombination proteins [BR:
saln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SALB1_2272
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SALB1_2272
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SALB1_2272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AWN16470
UniProt:
A0A2Z3JA92
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All DBs
Position
complement(2464579..2466018)
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AA seq
479 aa
AA seq
DB search
MAEPTFFWHDYETFGADPKRDKPAQFAGIRTDMDFNIIGDPLVLYCQPPADMLGHPEATL
ITGITPQYAAEHGVPEPEFIETIVAEMAKPGTCSVGYNSLAFDDEVTRHTLWRNFFDPYA
REWQNGCSRWDIINMVRLTYALRPDGIEWPKREDGAPSFRLDQLAPANNLAQERAHDALS
DVHATIGLAKLIRDKQPRLYDYVLNHRDKASARQLLDMDTRKPALHVSSKFPAENGCLSP
VMPIAAHPSNKNCIIVYDLRVDPAPLLELAPDEIHERIFTPSADLPEDTPRVALKGVHLN
KCPVLAPFEMMRENEVARLNLDINQCRRHWKAIHDRLTEVEAKATAVFDARVFDAESDAE
AALYDGFVSNDDRKRADAVRATAPAELADGAIVFADNRLNELLFRYRARHFPDSLTDAER
DDWRNWVAKRLEFAPDGGLTLDEYDDVVAALMERVQGDPARLQLLLDLKAWADKLRGML
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccgagccgaccttcttctggcacgactacgaaaccttcggcgccgaccccaagcgc
gacaagccggcccagttcgccggcatccgcacggacatggatttcaacatcatcggcgat
ccgctggtgctgtattgccagccgccggccgacatgctcggccaccccgaggccacgctg
atcaccggcatcacgccgcagtacgcggccgaacacggcgtgcccgagccggagttcatc
gaaaccatcgtcgccgagatggccaaacccggtacttgcagcgtcggctacaacagcctg
gcgttcgacgacgaagtcacccgccataccctgtggcgcaatttcttcgacccgtatgcc
cgcgagtggcagaacggctgctcccggtgggacatcatcaacatggtgcggctgacctat
gcgctgcgcccggacggcatcgagtggccgaagcgcgaggatggcgccccgagcttcagg
ctcgaccagctcgccccggccaataatctggcccaggagcgtgcgcacgatgcgctgtcg
gacgtgcacgccaccatcggcctggccaagctgatccgcgacaagcagccgcggctgtac
gactacgtcctcaaccaccgcgacaaggccagcgcccgccagttgctggacatggacacg
cgcaagccggcgctgcacgtctcgtccaagttcccggccgagaacggctgcctgtcgccg
gtgatgccgatcgcggcccacccatcgaacaagaactgcattatcgtctacgacctgcgg
gtggacccggcgccgctgctggagctcgcccccgacgaaatccacgagcgcatcttcacc
cccagcgcagacctgccggaagacacgccgagagtcgcgctcaagggcgtgcatctgaac
aaatgcccggtgctggccccgttcgagatgatgcgcgagaacgaagtcgcccggctcaat
ctcgacatcaaccagtgccggcgccactggaaggcgatccacgaccggttgaccgaggtc
gaggccaaggccacggcggtgttcgatgcccgggtattcgatgccgagtccgatgccgag
gccgccctgtacgacggcttcgtctccaacgacgaccgcaagcgggccgacgcggtacgc
gccaccgcccccgccgagctggccgacggggccatcgtgttcgccgacaaccggctcaac
gaactgcttttccgctaccgcgcccgccacttcccggattcgctcaccgacgccgaacgc
gacgactggcgcaattgggtcgccaagcggctggagttcgcgcccgacggcggactgacg
ctggacgaatacgatgacgtcgtcgccgcgctcatggaacgcgtccagggcgatccggcc
cgcctgcaactgctgctggatctgaaagcctgggcagacaagctgcgcggcatgctctga
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