Salinisphaera sp. LB1: SALB1_2368
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Entry
SALB1_2368 CDS
T05476
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
saln
Salinisphaera sp. LB1
Pathway
saln03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
saln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SALB1_2368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saln03400
]
SALB1_2368
DNA repair and recombination proteins [BR:
saln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SALB1_2368
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SALB1_2368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
RsgA_GTPase
AAA_23
DnaJ_CXXCXGXG
AAA_22
AAA_21
BCA_ABC_TP_C
nSTAND3
Viral_helicase1
cobW
NACHT
AAA_30
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
AWN16566
UniProt:
A0A2Z3J5L8
LinkDB
All DBs
Position
complement(2566124..2569072)
Genome browser
AA seq
982 aa
AA seq
DB search
MESHIRIRGARTHNLANINVDLPRDQLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSA
YARQFLSMMEKPDLDSIEGLSPAISIEQKSTSHNPRSTVGTVTEIHDYLRLLFARAGTPF
CPHHDEPLAAQSVSEMVDQTLTKAAESAWMLLAPVIRSRKGEHREIFEQMRGQGFVRMRV
DGEIIELDENVPELDPKKKHDLEVVVDRFKVRDGIQQRLAESFETALRLSEGIAWIMPWA
VEAEPEVFSSRFACPVCGYSINDMEPRMFSFNSPHGACPTCDGLGSQSVFDVDRVITDDS
LSLAGGAVRGWDRRNPYFFGLIESLAETYGFDVDTPWRDLPDPARKVILNGSGGKKIEFR
YVNARGNTRRRKHAFEGVLDNMQRRYAETDSLAVREELAKYLSDKACPTCDGARLNEAAR
HVRVADKTLPEINAASISGAYEIADNLTIRGHRAEIAAPILKEINQRLKFLLDVGLNYLT
LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNRRLLNTLERLRDLGN
TVIVVEHDEDAIREADYVVDMGPGAGDHGGQLIAQGTAAEIAAHPDSLTGQYLSSRLTIP
IPDRRIAYDAKRQIRIRGARGNNLKNVDAAFCMGQLTCVTGVSGSGKSTLINETLFPAAA
RQVNRAVARAAPVTAIDGLEHLDKVIDINQAPIGRTPRSNPATYTGLFGTIRELFANTPE
ARARGYKPGRFSFNVKGGRCETCQGDGVIKVEMHFLPDIYVTCETCHGARYNRETLEVHY
KGKTIAEVLDMRVEAAAEFFAPVPSLKRKLDTLIDVGLSYVKLGQNATTLSGGEAQRIKL
ARELSKRDTGRTLYLLDEPTTGLHFHDIKHLLEVLLRLREAGNAVVVIEHNLDVIKTADW
LIDLGPEGGSGGGEIIATGTPEDVAEVAASHTGQFLKPMLGDARPGTGHNTAGDKRDLAL
PPKKEKKTRKSPGRPKNNATAS
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtcatatccgcatccgcggcgcgcggacgcacaatctcgccaacatcaacgtc
gacctgccccgcgatcagttgatcgtgatcaccggcctgtccggttcgggcaagtcgtcg
ctcgccttcgacacgatctatgccgagggccagcggcgttacgtcgaatcgttgtcggcc
tatgcccgccagttcctgtcgatgatggaaaaaccggacctggattccatcgagggactg
tcgccggcgatctcgatcgagcagaagtcgacttcgcacaacccgcgctcgacggtgggc
acggttaccgaaatccacgattacctgcgcctgttgttcgcgcgcgccggcacgcccttc
tgcccgcaccacgacgagccgctggccgcccagagcgtgtcggaaatggtcgaccagacg
ctgaccaaggcggccgaatccgcctggatgctgctcgcaccggtgatccgctcgcgcaag
ggcgagcatcgggagatcttcgagcagatgcgcggccagggcttcgtacgcatgcgcgtc
gacggcgagatcatcgagctcgacgagaacgtgcccgaactcgatcccaagaagaaacac
gatctggaagtcgtggtcgatcgcttcaaggtgcgcgacggcatccagcagcggttggcc
gagtcgttcgagaccgcgctgcggctgtcggaaggcatcgcctggatcatgccctgggcc
gtagaggccgagccagaggtgttttcttcccggttcgcctgtccggtctgcggttattcc
atcaacgacatggaaccgcggatgttttcgttcaactcgccgcatggcgcctgcccgacc
tgcgacggcctgggctcgcagagtgtgttcgacgtggatcgggtgatcaccgacgacagc
ttgagtctggccggcggcgcggtacgcggctgggaccggcgcaacccgtatttcttcggc
ctgatcgaatcgctggccgaaacctacggcttcgacgtggacacgccctggcgcgatttg
ccggacccggcccgcaaggtgattctgaacggctccggcggcaaaaagatcgagttccgc
tacgtcaacgcgcgcggcaacacgcgccgtcgcaagcatgccttcgagggcgtgctcgac
aacatgcagcgccgctatgccgagaccgattcgctggcggtacgcgaggaactggccaag
tatctgtcggacaaggcctgcccgacctgcgacggcgcgcgtctgaatgaggcggcacgg
catgtccgcgtcgccgacaagaccctgcccgagatcaacgcggccagtatttccggcgcc
tacgagatcgccgacaacctcacgattcgcggccatcgcgccgagatcgcagcccccatc
ctcaaggagatcaaccagcggctgaaattcctgctggatgtcggactgaattatctgacc
ctgtcgcgcagcgccgagacgctttcaggcggcgaggcccagcgcattcgcctggccagc
cagatcggcgccgggctggtgggcgtgatgtatgtgctggacgaaccgtccatcggcctg
caccagcgcgacaaccgccgcctgctgaatacgctggaacgcctgcgcgatctcggcaat
accgtgatcgtggtcgagcacgacgaggacgccatccgcgaggccgactacgtggtcgac
atgggcccgggcgcgggcgatcacggcggccagctcatcgcccagggcacggcggccgag
atcgccgcgcacccggattcgctgaccggccagtatctgtcgtcccggctgaccattccg
atccccgacaggcggatcgcttacgacgccaagcgccagatccggatccgcggcgcgcgc
ggcaacaatctcaagaacgtggatgccgcgttctgcatgggccagctcacctgcgtgacg
ggcgtatccggctcgggcaagtcgacgctgatcaacgagaccctgttcccggccgccgcg
cgtcaggtcaatcgggccgtggcgcgcgccgcgccggtgaccgcgatcgacggcctggag
catctggacaaggtcatcgatatcaaccaggcgccgatcgggcgcacgccgcgctccaac
ccggccacctataccggcctgttcggcactatccgcgagctgttcgccaacacgccggaa
gcccgggcccgcggttacaagccggggcggttttcgttcaacgtcaagggcggacgctgc
gaaacctgtcagggcgacggcgtgatcaaggtggaaatgcatttcctgccggatatttac
gtcacctgcgagacctgccacggcgcgcgctacaaccgcgaaacgctggaagtccattac
aagggcaagaccatcgccgaggtactggacatgcgggtcgaggcagccgccgagttcttc
gccccggtgccgagcctcaagcgcaagctggacacgctgatcgacgtcggcctgtcctac
gtcaagctgggccagaacgcgaccacgctgtccggcggcgaggcccagcgcatcaagctc
gcccgcgagctatccaagcgcgataccgggcgcacgctctatctgctggacgaaccgaca
accggcctgcacttccacgacatcaagcatctgctggaggtactgctgcgcctgcgcgag
gccggcaacgccgtggtcgtgatcgagcacaatctggacgtgatcaagaccgccgactgg
ctgatcgatctcggcccggaaggcggctcgggcggtggcgagatcatcgccaccggcacg
ccggaggatgtggccgaggtggcggcatcgcacaccggacagttcctcaaacccatgctg
ggcgatgcacggcccggcaccggccacaacaccgctggcgacaagcgcgacctggcgctg
ccgccgaaaaaagagaagaaaacccggaagtcccccggccggccgaaaaacaacgccacc
gccagctga
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