Salinisphaera sp. LB1: SALB1_2561
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Entry
SALB1_2561 CDS
T05476
Name
(GenBank) diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
Organism
saln
Salinisphaera sp. LB1
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
HAMP
GAF
YlxR
HAMP_2
Motif
Other DBs
NCBI-ProteinID:
AWN16757
UniProt:
A0A2Z3JEK0
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Position
2788420..2791182
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AA seq
920 aa
AA seq
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MRLTIAAFHGNFARRLFLRFIVAAALPVLVIALLAYLNTTQVVIGEAHDRLHRSSRNEGM
AILDRLELAAALLKYVDQTGGRYSKSSAHVFAALGMVSSTMPRPHMLWGDPAALSGAQAL
AARARRSAGDPVIGVAGPGAVFMAIFAGPRRPHSQVLIGRLNLGEILGAPSTWPGGTRFC
VFTAANGRALNCPNNHRVFEATRHGHKSRVLVPGKRLLVAHWDLFLDSNFHAPMWRIVGL
QPFDYASRSARVFYWLLPLVLLLSLLFAGLVGLMQIRRISQPLRKLRAGVQAIARGEFDS
RVRIQSRDEFEELGESVNGMARRLGAQFHTLEALAALDRRVLAAANVAELIEQILTQIPR
VVGSDSAALIVIDPDLPRIADCYCVKGCGASIENERLSLSEDELIALGREWTEHVRPDEI
AVPAYLGPLMGLGAIRVDCLPAREEGRLWAVLLLAYRGEPWSSTDDQSHALADRIAVALA
ATYRSRQLYRQAHFDALTGLPNRKLYMDRAETLLVQARRRAQRFAVLFIDLDQFKNVNDA
EGHTAGDQLLKHAATRITGALHEADIAARWGGDEFVVLLSDSQQMADIDGPCERLIEGLG
ENFVIGSIEYHVGASIGIAVYPDDGETIEALLANADAAMYEAKAAGRGCYVFFEPRMNEA
VRRRVQLETELRQAVARQEFFLEYQPLIRPADGEVGGAEALLRWCHPTRGIVPPGEFIAA
LEQTGLIVEVGAWVLAEACRQVASGFTQDGRAPDQVMVNVSPRQFWASDFVATVDRVLAD
SGVDASRLEIEITENLLLSDLDAACDVAEQLRARGLQLAMDDFGTGYSSLSYLRRLPVDT
VKIDQAFATGIEITDSEASTVVRAMIEMLHALNRRVVVEGIENEQQFAFVRAAGCDLAQG
FYMSRPVAPEALYDFQRPGA
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgacaatcgcggcttttcacggcaacttcgcgcgccgactgtttctaaggttt
atcgtcgcggccgcgcttccggtactcgtcatagcgctgctggcttatctcaatactacg
caggtcgttatcggcgaggcccacgatcgtctccatcgcagtagccgtaatgagggcatg
gccattctcgaccggcttgaactggctgctgctctgctcaaatacgtcgatcagacgggg
ggccgctactccaaaagctcggcgcacgtgttcgcggctttgggcatggtcagctccacg
atgccgaggccgcacatgttgtggggcgatcccgcggccctgagtggtgcgcaagcgcta
gccgcacgcgcccgccgcagtgccggcgaccccgtgattggcgtcgccggcccgggcgcg
gttttcatggcgatattcgcagggccgaggcgcccgcactcccaggtcttgatcggccgt
ttgaatcttggcgaaatactgggcgcgccgtcgacatggcctggcggaacgcgattctgt
gtgttcacggccgcaaacgggcgcgcattgaactgcccgaataatcaccgcgtgttcgaa
gccacgcggcacggccataaatcccgcgtgctagtaccgggcaagcggcttctggtcgcg
cattgggatttattcctcgacagtaattttcatgcgccgatgtggcgtatcgtcggcctg
cagccctttgattacgccagccgatcggcgcgcgtgttttactggttgctgccgctggtt
ctgctgctgagccttttgtttgcgggcctggttgggctaatgcagattcgtcgtatcagc
cagccgctgcgcaagctgcgcgccggcgtacaggcgatagcgcgcggtgaattcgatagt
cgagtgcgcattcaaagccgcgatgagttcgaggaactgggcgaatcggttaacggcatg
gcgcgacgcctgggcgcacagttccatactctcgaagcgctggctgcgctcgaccggcga
gttttggccgccgccaatgtggccgagctcatcgaacagatactcacgcagataccgcgg
gtcgtcggctcggatagcgccgcgctgatcgtaatcgatccggatctcccgaggattgca
gactgctattgcgtgaaaggctgcggagcgtcgatcgaaaacgagcgtttatccctatcc
gaggacgaactgattgcgctgggccgcgagtggaccgaacacgtgcgcccggacgagatc
gctgtaccggcttatctcgggcccctgatgggcctcggtgcgatacgggtcgactgcctg
ccggctcgtgaagaggggcgtctttgggcggtcttgttgctggcctatcgcggcgagccg
tggtcgagcacagatgatcagtcgcatgcgctggccgatcgcatcgccgtggcactggcg
gccacgtatcggagccgccagctttatcgacaggcgcacttcgacgcactgaccggttta
cccaaccgaaaattgtacatggaccgggcggaaacgcttctggtgcaggcgcggcgccgg
gcgcagcgctttgctgttctgtttatcgatctcgatcagttcaagaacgtcaacgacgcc
gaagggcacactgctggcgaccaactgctcaagcatgctgccacacgaattaccggcgcg
ttgcacgaggccgatatcgccgcgcgctggggcggcgatgagttcgtggtactgctttcc
gatagtcagcagatggcggacattgacgggccgtgcgagcgtttgattgagggcctgggc
gaaaattttgtgatcggctcgatcgaatatcacgtgggcgcgagtatcggtatcgcggtg
tacccggacgacggcgaaaccatcgaggccttgctggccaacgcagatgccgcgatgtac
gaggccaaggccgccgggcgcggctgctatgtttttttcgagccacgaatgaatgaagcc
gtgcggcgccgggttcagctcgaaaccgaattacgccaagcagtggcacgccaggagttc
tttcttgaataccagccgctcatccgacccgcggacggcgaagtcggcggtgccgaggcg
ctgctgcgctggtgccacccaacgcgcggaatcgttccaccgggggagttcatcgctgca
cttgaacagaccggactcatcgtcgaagtcggcgcctgggtgcttgccgaggcatgccgg
caagtggcttcggggttcacgcaagacggccgcgcgccggatcaggtcatggttaacgta
tcgccacgccagttctgggcgtcggattttgtggccacggtcgatcgcgtattggcagac
agtggcgtcgatgcctcgcggctggagatcgaaatcacggaaaatctgctgctatcggat
ctcgatgccgcctgtgatgtggcggagcaactgcgcgcgcggggcctacagcttgcgatg
gacgatttcggtaccggctattcgtcgctcagctacctgcggcgtctgccggtggatacg
gtcaagatagaccaagccttcgctaccggcattgaaattacggacagcgaagcgagtacg
gttgtccgtgccatgattgagatgctgcatgcgctgaatcgacgtgtcgtggtggaaggc
attgagaatgaacagcagtttgcctttgttcgcgcggccggctgcgatctggctcagggc
ttctacatgagccgccccgtcgctcccgaagctctctacgatttccagcgtcccggggca
tga
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