Salinisphaera sp. LB1: SALB1_3066
Help
Entry
SALB1_3066 CDS
T05476
Name
(GenBank) Exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
saln
Salinisphaera sp. LB1
Pathway
saln03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SALB1_3066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saln03400
]
SALB1_3066
Enzymes [BR:
saln01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SALB1_3066
DNA repair and recombination proteins [BR:
saln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SALB1_3066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AWN17260
UniProt:
A0A2Z3JCB0
LinkDB
All DBs
Position
complement(3364106..3367513)
Genome browser
AA seq
1135 aa
AA seq
DB search
MFYLYHHNDLSRLAELFGALRGRRSRAPLAVDTVLAPNAGIGRWLRIQLAESEGIAANID
GRLPGAFIWDMLHATMDGADAGDHFEPDCLPWHLYAALPEIAREVPAVSDYLGTPVDEVR
RYQLARQLADVFDQYLVYRADMLAAWEAGEVPASNPGRWQARVWHWLTRDHRLGTTHRAR
VLTNFITRLGNEATLQQRVIDFCPDELYCFGLVALAPDHLRLLYALAEHIDVHFLLPNPS
AAYWGDITAGRLPLDLPAAASPDADTLLPGEAAVEAGHPLLSALGRMARDTLRVLYSDEF
AGMIEPELGDLMDYDIPRPDTLLHRVQADIVELDCSGSAQGMDDTDTSFEVHACHSPLRE
IQVLQDQLLDRLAADDKRVAAGEISEAERLAPRDIIVMLPDVAAYAPAIQAVFGGAPPER
YLPFGLADRARSAAHPIVTCVSALLDLPLSRWAASELLDLLAVPAVMRRFGLSAGELDAI
TKWIGEAGIRWGRDAHHRAGLGAGAFEQNSWRFGLDRLLLGVVQSDDETLTAGVAPWSDL
EGGITAALGKLWRFEDTLATVADGLAEPGTPGEWQTRLNAMVDRLIAPSMDAPDEQRAVD
SLRSVFARFDPAENCTRDKPLTADRRLSWPAVRDSLRATLETATERQPFLAGGITFCGMV
PLRAVPFRVVCVLGMNDSAFPRQDTGRAFNAMFDAPRLGDRNIRDDDRLLFLQALTAARD
AFYISYIGQDVNTGEELPPSPIVGETLEFLRRHYFRGEDKKRFERRLIHRQPMQPFSLRY
FSRHEPDARVFTYVNDWGDATRAAIGARRTREPLLDDSTAPIAEAIEVIDLDTLKRFFDH
PARVFFRERTQLNLEIEDRQVDDAEPVALDPLAAAQLRERLFESADKTNAPAIDLAPTAL
ERARGALPPPPLAAPNYAEQAEAVNELLPIWQAWKAEGTPETLDIQLDLVLPESHIVRVT
GRIAQCWPGAMRRLRTGKLKTRFRLRYWIDYLAAVAAGHVLDMHMAGFAPDKKTAERIEY
AGRVDAETAHTELAHLLQLYLAGQTRPLHYHPDLDDSYKPTQNKAFDNLSFRFKPAAYHP
HHLMRDPYFSMLLGPSEAPLGDTEDDSPFVAAIDAISGLMNQAIRPIESNAEAPA
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgttctatctctatcaccacaacgatctgtcgcggctggccgagctgttcggcgcgttg
cgcgggcggcgatcgcgggcgccgctggcagtggataccgtactggcgcccaacgccggc
atcggccgctggctgcgtatccagctggccgaaagcgaaggcatcgccgccaacatcgac
ggccgcctgcccggcgcgttcatctgggacatgctgcacgccacgatggacggcgccgac
gcgggcgatcacttcgaaccggattgcctgccctggcatctgtatgccgcgctccccgag
atcgcgcgcgaggtgccggccgtgtcggattatctcggtacgccggtggacgaagtccgc
cgctaccagctcgcccgtcagcttgcggatgtctttgaccagtacctggtctatcgcgcc
gacatgctggccgcctgggaagctggggaggtgccggcgtccaaccccggccgctggcag
gcgcgcgtgtggcactggctcacgcgcgaccatcgcctcggcaccacgcaccgcgcccgc
gtgctcacgaacttcatcacacgcctgggcaacgaggcgacgctgcaacaacgcgtgatc
gatttctgtccggacgagctgtattgcttcggcctggtggcgctcgcacccgatcacctg
cgcctgctttacgcgctggccgagcatatcgatgtgcatttcctgctgccgaacccgagt
gctgcctactggggcgatatcaccgccggccggctgccgctcgatctgccggcggccgcc
agcccggacgcagacaccctgctgcccggcgaagccgcggtcgaggccggccacccgctg
ctgtccgcgctcggtcgcatggcgcgggatacgctgcgcgtgctgtattccgacgagttc
gcgggcatgatcgaacccgagctgggcgatctgatggattacgacatcccgcggcccgac
accctgctgcaccgggtgcaggccgacatcgtcgaactggattgcagcggctcggcccag
ggcatggatgacaccgacacctcgttcgaggtgcatgcctgtcacagcccgctgcgcgag
atccaggtgctgcaggaccagctgctggatcgcctggccgcggacgacaagcgcgtcgcg
gccggcgagatcagcgaggccgaacggctcgccccgcgcgacatcatcgtcatgctgccg
gatgtcgctgcctacgccccggcgatccaggccgtcttcgggggcgcgccgcccgagcgc
tacctgcccttcggcctggccgatcgcgcccgctcggcggcccatcccatcgtgacctgt
gtctcggccctgctcgacctgccgctgtcgcgctgggcggccagtgaactgctcgacctg
ctcgccgtgccggcggtcatgcgccggttcggcctctcggccggcgagctggatgcgatc
accaagtggatcggcgaggccggtatccgctgggggcgcgatgcccatcaccgggccgga
ctcggcgccggtgcgttcgaacagaacagctggcgcttcgggctcgaccgcctgctgctg
ggcgtcgtccagtccgacgacgaaacgctcaccgccggggtggcgccgtggtccgatctg
gaaggcggcatcaccgccgcgctcggcaaactctggcgcttcgaggacacgctcgccacc
gtcgccgacggcctcgccgagccgggcacgccgggcgaatggcagacgcggctcaacgcc
atggtggatcggctgattgcgccatcgatggacgcgccggacgaacaacgcgcggtcgat
tccttgcgcagcgtattcgctcgcttcgacccggctgaaaactgtacccgcgacaagccg
ctcaccgccgatcggcgcctgtcctggccggccgtgcgtgacagcctgcgcgccacactg
gaaaccgcgaccgagcgccagccgttcctggccggcggcatcaccttctgcggcatggtg
ccgctgcgcgccgtaccgtttcgcgtggtctgcgtgctgggcatgaacgattccgccttc
ccgcgccaggacaccggccgggccttcaacgccatgttcgacgccccgcggctgggcgat
cgcaacatccgcgacgacgaccgcctgctgttcctgcaggcgctcaccgctgcgcgcgat
gccttctacatcagctacatcggccaggacgtgaataccggcgaagaactgccgccctcg
ccgatcgtgggcgaaacactggaattcctgcgccggcattatttccggggcgaggataaa
aaacgcttcgagcgccggctgattcatcgccagccgatgcagccgttttcgctacgctac
ttctcgcgccacgagccggacgcccgcgtattcacctatgtcaacgactggggcgacgcc
acgcgcgcagcgatcggcgcccgccggacgcgcgaaccgctgctcgacgacagtaccgcc
ccgatagccgaagccattgaggtcatcgatctggacacgctcaagcgctttttcgaccac
ccggcccgggtcttcttccgcgaacgtacccaactcaatctcgagatcgaggatcgccag
gtcgacgacgccgaaccggtcgcgctcgacccgctggctgccgcgcaactgcgtgagcgc
ctgttcgaatccgccgacaagacgaacgcaccggcgatcgacctggccccgaccgcgctc
gaacgcgcccggggtgcgctgccgccgccacccctggccgcgccgaactatgccgagcag
gccgaggcggtcaacgaactgttgccgatctggcaggcgtggaaagctgagggcacgccg
gaaacgctggatatccagctcgatctggtccttcctgagtcgcatatcgtccgtgtaacc
gggcgcatcgcccagtgctggcccggggcgatgcgtcggctgcgcaccggcaagctcaag
acccgcttccgcctgcgctactggatcgattacctggccgcggtggccgccggccacgta
ctggatatgcacatggccggcttcgcccccgacaagaaaaccgcggagcggatcgaatac
gccggccgggtcgatgccgaaaccgcccacaccgagctggcgcatctgctgcagttgtac
ctcgcgggccagactcggccactgcactatcacccggatctggatgacagctacaagccg
acgcagaacaaggccttcgacaacctcagctttcgcttcaagcctgcggcctatcacccg
catcacctcatgcgcgatccgtatttttccatgctgctcggcccgtccgaggcaccgctc
ggcgacaccgaggacgacagccccttcgtcgcagcgatcgatgccatcagcgggctgatg
aatcaggcgatccgcccgatcgagagcaacgccgaggccccggcatga
DBGET
integrated database retrieval system
