Salinisphaera sp. LB1: SALB1_3338
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Entry
SALB1_3338 CDS
T05476
Name
(GenBank) deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
saln
Salinisphaera sp. LB1
Brite
KEGG Orthology (KO) [BR:
saln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saln03400
]
SALB1_3338
Enzymes [BR:
saln01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
SALB1_3338
DNA repair and recombination proteins [BR:
saln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
SALB1_3338
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AWN17532
UniProt:
A0A2Z3J8B4
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Position
3672020..3673588
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AA seq
522 aa
AA seq
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MAGIRNLVIVLGDQLDRGLSALDDYDPEQDVVWMAENQTEATHVWCHKKRLVLFFAAMRH
HRDDLCARGYRVWYHALDVDGRRDSGVDFVAILTTAVRELGPKRLVMTECGDYRVQRVLA
DCAKHHDLPLQVRPDRHFYCRLEAFNDWADARGSLTLEYFYRWMRRTEHILMVGDQPEGG
QWNFDKQNRQTFGRDGPGELPPLRRFRPDAITRAVIDMVAARFDGHPGHIESFDLPVTPE
EARTALRDFIDHRLALFGDYQDALWTDMPFAYHSRLSAALNLHLIGPRECVDAAIAAYES
GKAPLNSVEGYIRQLLGWREFVRGLYWHEMPAYAGRNALRAELPVPRGYWDGDTDMACVA
DAMRNVVDNGYAHHIQRLMVLGLFALVAGVHPYRFHEWHMAMYLDAIDWASLPNSLGMSQ
FGDGGLLGTKPYCASGNYINKMSNYCKHCRFDYKQASGDKACPITTLYWDFLDRNLEAFR
DNRRMVFQVKNLERKRADTELMAAIRRQARTLRQQIEDGERI
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
ttggctggtatccgaaatctcgtcatcgtgctcggcgatcagttggatcgcggcctgtcg
gcgttggacgattacgatcccgagcaggatgtggtctggatggcggaaaaccagaccgaa
gcgacgcatgtgtggtgccacaagaaacggctggtgctgttttttgccgccatgcgccat
catcgcgacgatctgtgcgcgcgtggataccgcgtctggtaccacgcgctggacgtggac
gggcggcgcgacagcggcgtcgatttcgtggcgatcctgaccaccgcggtacgcgagctc
ggcccgaagcggctggtgatgaccgaatgcggtgattatcgggtacagcgcgtactggcc
gattgtgcaaagcaccacgacctgcccctgcaggttcggcccgatcgccacttctactgc
cgtctcgaggctttcaacgactgggccgatgcccggggctcgctgacgctggagtacttc
tatcgctggatgcggcgcaccgagcatatcctgatggttggcgaccagccggaaggcggc
caatggaatttcgacaagcagaaccgccaaacctttggccgagacggccccggcgaactc
ccgccgcttcgtcgttttcggccggacgcgatcacgcgagccgttatcgatatggtcgca
gcgcgattcgatggtcaccccggccacatcgagagcttcgacctcccggtcacccccgag
gaagcgcgcacggcgttgcgcgatttcatcgaccatcggctcgcgttgttcggcgactat
caggatgcgctctggaccgacatgccgttcgcctatcactcccgcctgtccgccgcgctc
aatcttcatctcatcggcccgcgcgaatgcgtcgacgcggctatcgcggcttacgagtcc
ggcaaggcgccgctgaacagcgtcgagggatatatccgccagctgctgggatggcgggaa
ttcgtgcgcggcctctattggcacgaaatgcccgcctatgccggccggaacgcgctgcgc
gccgaattaccggtgccgcgcgggtattgggacggcgacaccgatatggcctgtgttgcc
gacgccatgcgcaacgtggtggacaacggttacgcccatcatatccagcggctgatggtg
ctcgggcttttcgcgctcgtggccggcgtgcacccgtaccgctttcacgaatggcatatg
gcgatgtatctggatgccatcgactgggccagcctgcccaactcgctcggcatgagccag
ttcggcgatggcggcctgcttggcaccaaaccgtattgcgcatcaggcaattacatcaac
aagatgagtaattactgcaagcattgccggttcgactacaagcaggcaagtggcgataaa
gcgtgtccaataacaacgctttactgggatttcctcgaccgtaatctagaggcttttcgc
gataatcggcgcatggtgtttcaggtcaagaacctggaaaggaaacgcgcggatacggaa
ttgatggcggccattcgtcgccaggctcgtacgctccggcagcagatcgaagacggcgaa
aggatttga
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