Salinisphaera sp. LB1: SALB1_3341
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Entry
SALB1_3341 CDS
T05476
Name
(GenBank) Deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
saln
Salinisphaera sp. LB1
Brite
KEGG Orthology (KO) [BR:
saln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saln03400
]
SALB1_3341
Enzymes [BR:
saln01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SALB1_3341
DNA repair and recombination proteins [BR:
saln03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SALB1_3341
Prokaryotic type
SALB1_3341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AWN17535
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All DBs
Position
3675499..3676944
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AA seq
481 aa
AA seq
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MKKRVIIWFRRDLRLADNPALHAALAAEFDSIVPVFIHAPDELGDWAPGGAQRVWQHFSL
AALDTDLQALGSRLVIRHGPTIAALDALIEESGACAVYWNRLYDPDTIARDKRVKRHLED
ANVQTASFNAALLHEPWTVSTRQNTPYKVFTPFWKAIRDQPVRNPLPAPEALPAVWSRIG
SQALPDLGLLPNIRWDTGIRDAWQPGANGAHARLETFVNDTLGGYGDSRERPAQPGTSCL
SPHLHFGEIGPRQIVHRVEEWLYDHGNESHREHANIFLSEIGWREFAHHVLFHFPNTPDE
PLDPRFKHFPWAEDDEALQAWQAGRTGIPMVDAGMRELWATGIMHNRLRMTVASFLTKNL
RIAWQHGERWFWDTLVDADLANNTLGWQWAAGCGADAAPFFRIFNPARQGERFDADGAYV
RRWVPELSGLPDKHIHRPWAAPQKALDDAGVTLGQTYPNPIVDLKASRQAALDAFDRIKN
T
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacgcgtgattatctggtttcggcgcgacttgcgactggcggacaatccggcg
ctgcacgctgcgctcgcggcggaattcgactcgatcgtgccggtgttcattcatgcgcct
gacgaactcggcgactgggcgccgggcggtgcgcaacgcgtctggcaacatttttccctt
gcggcgctggacaccgatctacaggcgctgggttcgcggctggtgatccggcacgggccg
acgatagccgcgctggatgcgttgatcgaagaaagcggggcatgcgcggtctactggaat
cggctgtacgatcccgacacgatcgctcgcgataaacgggtgaagcgccacctcgaggat
gcaaacgtccagaccgccagctttaacgccgccttgctgcacgaaccgtggaccgtttcg
acccggcagaacacgccgtacaaggtgttcacgccgttctggaaagccattcgcgaccag
ccggtgcgaaatccactccctgcccccgaggcgttgccggcggtgtggtcccggattggt
tcgcaggcgctgccggatctgggcctgctgccgaatatccgatgggatacgggcatccgt
gatgcgtggcagccgggcgcgaacggtgcccacgcgcgcctggaaacctttgtgaacgac
acgctcggcggctatggcgacagccgtgagcgccccgcgcagcccggcacgtcgtgtctt
tcgccgcatttgcatttcggtgagatcgggccccgccagatcgtccatcgtgtggaagag
tggttgtacgaccacggtaatgaatcgcatcgtgagcatgcgaatatctttctcagcgaa
atcggctggcgtgagttcgcacaccacgtgttgttccactttccgaacacgcccgatgaa
ccgctcgatccacggttcaagcatttcccctgggccgaggatgacgaggccctgcaggct
tggcaggcaggccgcaccgggatcccgatggtggatgccggcatgcgcgagctttgggcg
accggcatcatgcacaaccgcctgcgcatgacggtggcgtcgttcctgaccaagaatctg
cggatcgcctggcagcatggcgaacgctggttctgggatacgctggtggatgccgatctt
gcgaacaatacgctcggctggcaatgggcggcgggttgtggcgctgacgccgccccattc
ttccgtatattcaatccggcacgccagggcgagcgtttcgatgcggacggcgcgtacgtc
cgacgttgggttcccgagctcagcggcctgccggacaaacatattcatcggccatgggcc
gcgccgcagaaagcgctcgacgatgccggcgtgacgctgggccagacctatccgaacccg
attgtcgatctcaaggcttcgcgccaggcggcgctcgacgcgttcgatcggatcaagaat
acatag
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