Salinisphaera sp. LB1: SALB1_3361
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Entry
SALB1_3361 CDS
T05476
Name
(GenBank) Integration host factor beta subunit
KO
K05788
integration host factor subunit beta
Organism
saln
Salinisphaera sp. LB1
Brite
KEGG Orthology (KO) [BR:
saln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saln03032
]
SALB1_3361
03036 Chromosome and associated proteins [BR:
saln03036
]
SALB1_3361
03400 DNA repair and recombination proteins [BR:
saln03400
]
SALB1_3361
DNA replication proteins [BR:
saln03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SALB1_3361
Chromosome and associated proteins [BR:
saln03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
SALB1_3361
DNA repair and recombination proteins [BR:
saln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
SALB1_3361
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AWN17555
LinkDB
All DBs
Position
complement(3697760..3698047)
Genome browser
AA seq
95 aa
AA seq
DB search
MTKSELIERLVDRQAHMTQRDVELAVKLLLDDVIEELAEGGRVEIRGFGSFSVHHRPARR
GRNPKTGEAVDIPRKYVPHFKPGKELRERVNKPQS
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgactaaatccgagttgatagagcgtctggtcgatcgccaggcacacatgacccagcgc
gacgtggagctggccgtcaaactgctgctggacgacgtgatcgaggagcttgccgagggt
gggcgtgtcgagatccgtgggtttggcagtttttcggtccatcaccgaccggcgcggcgt
ggccgcaaccccaagacgggcgaggccgtggatattccgcgcaagtacgtgccgcatttc
aagccgggcaaggaactccgcgagcgggtcaacaagccgcaatcctag
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