Silicimonas algicola: EF888_00155
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Entry
EF888_00155 CDS
T05779
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
salo
Silicimonas algicola
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
salo02000
]
EF888_00155
Transporters [BR:
salo02000
]
Other transporters
Pores ion channels [TC:
1
]
EF888_00155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
BON
Motif
Other DBs
NCBI-ProteinID:
AZQ69518
LinkDB
All DBs
Position
complement(29666..31546)
Genome browser
AA seq
626 aa
AA seq
DB search
MVAICIAAAGCVGVAFWARSLIEAEALTDVSLVLSQSGHDWTEVDVDGLQVTLAGIAPDE
ATRFAALSSAGSVVDASRLIDRMQVAAAAAIRPPDFSIEVLKNDDGISLIGLVPLESSPE
TIVERVRAMGGGANVADLLESADFAPPPGWEEALSFGIEALDNLPRSKVSITPASVAITA
VARTPEDKTNLERQLNREAPAGLDLVLHISAPRPVVAPYTLRFLIDEAGARFDACTANSE
EGRNAILAAAAEAGLTGTVDCVLGLGTPSTRWSEAAVAGIRAVQTLGSGTLTISNADVSL
VGTQGTPQSEFDDAAADLDAALPPVFSLSAFLPEPPEQQAEGASAPAEFSATLSPEGQLQ
MRGRLADDQSRASVQNFAAARFGASKVQLATRIDDDVPAGWPNRVLAALDAFRYLHNGTL
TVTEKTLRISGKTGRTNAQADMARILSDRLPEGATYSLDVAYSEELDPLAALPTPEECIQ
MIQAAGNKRKITFEPSSSEIDRDAVATVDAIADILRDCRDTPIEIGGFTDSQGRETMNQQ
LSQARADAVLNAIMARRVLTSNLRARGYGEDQPIADNDTEAGREANRRIEFRLIDPNEPD
EPEIPAEDSAGADEAETTDEAEETTE
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggtggcgatctgcatcgctgcggcgggctgcgtcggcgtcgcgttttgggcccgaagc
ctgatcgaggccgaggccctgacggatgtcagccttgtgctgtcgcaatcagggcacgac
tggaccgaggtggacgtcgatggtcttcaggtcaccttggccggcattgccccggacgag
gcgacgcggttcgcggcgctttcctcggccggcagcgtggtcgacgcgtcccgactgatc
gaccggatgcaggtcgccgctgctgccgcgatccggccgcccgacttctcgatcgaggtc
ttgaagaacgacgatggcatttccctgatcggtctcgtcccgcttgaatcgagcccggag
acgatcgtcgagcgggtgcgcgccatggggggcggggcaaatgtggccgaccttctggaa
agcgccgatttcgcaccgccgccgggatgggaggaagccctgtccttcggaatcgaggcg
ctggacaatctgccgcggtcgaaggtgtcgatcacgccagcaagcgtcgcgatcaccgcc
gttgcgcggacgcccgaagacaagaccaacctggaacggcagctcaaccgcgaggcgccc
gccgggctggacctcgtcctgcacatttcggcgccgcgccccgtcgtcgcgccctatacg
ctgcggttcctgatcgacgaggcgggcgcccgtttcgatgcctgtaccgcgaattcggag
gaaggccggaacgccatcctcgccgctgccgccgaggcgggtctgaccggcaccgtcgac
tgcgtcctgggactgggaacgccgtccacgcggtggagcgaagccgccgtcgcgggcatt
cgcgcggtgcagacgcttgggtctggaacgttgacgatctcgaacgccgatgtctcgctg
gtcggaacgcaaggcacgccgcagagcgaattcgacgatgcggcggcggaccttgacgcc
gcccttcccccggtcttctcgctgtcggccttccttcccgaaccgcccgagcagcaggcc
gaaggcgcctccgcccctgccgagttctcggcgaccctctcgccggaaggccagcttcag
atgcgcgggcggctcgccgacgaccagagccgggcctcggtccagaacttcgccgcggcg
cgctttggcgcgtcgaaggtccagcttgcgacccgcatcgatgacgacgtgccagctggc
tggccgaaccgcgtcctcgccgcgctcgacgcgttccgctacctccacaacggcaccctg
accgtgaccgagaagacgctgcggatctcgggcaagacgggacggacgaacgcgcaggcg
gacatggcgcggatcctgtcggaccggctgcccgagggggcgacctacagccttgacgtg
gcctattccgaagagcttgacccgcttgctgccctgccgacccccgaagagtgcatccag
atgatccaagcggcggggaacaagcggaagatcaccttcgagccgtcatcgtccgaaatc
gaccgcgatgccgtcgcaaccgtcgacgccatcgcagacatcctccgcgattgccgggac
acgccgatcgagatcggggggtttaccgacagccagggccgcgagacgatgaaccagcaa
ctcagccaggctcgcgccgacgctgtgctgaacgccatcatggcgcggcgggtcctgacg
tcgaacctgcgcgcgcgaggctacggggaagaccagccgatcgccgacaacgataccgag
gccggacgcgaagccaaccgccggatcgagttccggctgatcgaccctaacgagccggac
gagccagagatccccgccgaagacagcgcgggggcggacgaagcggaaacgacggacgag
gcagaggagacgacggaatga
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