Silicimonas algicola: EF888_00345
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Entry
EF888_00345 CDS
T05779
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
salo
Silicimonas algicola
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salo03000
]
EF888_00345
Transcription factors [BR:
salo03000
]
Prokaryotic type
Helix-turn-helix
LacI family
EF888_00345
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
HTH_AraC
Sigma54_DBD
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AZQ69522
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Position
complement(67150..68172)
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AA seq
340 aa
AA seq
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MEPAQRPLTLKDVSLASGVSEMTVSRVLRNRGDVSDATREKVLKAAKELGYVPNKIAGAL
ASSRVNLVAVIVPSLSNMVFPDVLTGIQEVLDGTPLQAVFGVTNYSPEKEEEVLFEMLSW
RPSGIILAGLEHSDASRSMLRSSGIPVVEIMDTDGEPIDAVVGISHRRAGREMARFIVRN
GYRNIGFLGSKMPMDHRARKRFEGFTEALAKEGIEVQDQDFYDGGSSLLKGREMTARMLA
RTPELDFLYYSNDMIAAGGMLHCLDNGIDVPGQVGLAGFNGSEFLAGFARRLATMDSGRR
EIGREAARIIAERTADAALPPGQKIELSPRIEPGDTLVRK
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgctcagcggccgctgacgctcaaggacgtgtcgcttgcctcgggcgtgtcg
gaaatgacggtcagccgcgtcctgagaaaccggggcgacgtgtcagacgcgacgcgtgaa
aaggtcctgaaggccgctaaagagctaggctacgtcccgaacaagatcgccggcgccctg
gcgtcgagccgcgtgaacctcgtcgccgtgatcgtgccctcgctgtcgaacatggtattt
cccgacgttctgaccggcatccaggaagttctggacggaacgccgcttcaggccgtcttc
ggcgtcaccaactactctcccgagaaggaagaggaagtcctgttcgagatgctgtcttgg
cgaccatcaggcatcatcctcgcgggtctcgaacattcggatgcgtcgcgcagcatgctg
cgctcgtccgggatcccggtggtcgagatcatggacaccgatggcgagccgatcgacgcc
gttgtcggcatcagccaccgccgggcagggcgagaaatggcgcggttcatcgtgcggaac
ggctatcgcaacatcggctttctcgggtcgaagatgcccatggaccaccgagcccgcaaa
cgcttcgaaggcttcaccgaggcgctggccaaggaaggcatcgaagttcaggatcaggac
ttctacgacggcggctcgtctcttctgaagggacgcgagatgaccgcccggatgttggcc
cgaacgcctgagctcgacttcctctactactcgaacgacatgatcgcggccggcggaatg
cttcactgcctcgacaacggaatcgacgttcctggccaggtgggcctcgccggattcaac
ggctcggagtttctggcgggcttcgcgcgccgtctggccaccatggattcgggacggcgc
gagatcgggcgcgaagcggcccgtatcatcgcggagcggacagcggacgccgccctgccg
ccgggacagaagatcgaactgtccccacgtatcgagcccggagacactctcgtccgcaag
tag
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integrated database retrieval system
