Silicimonas algicola: EF888_00435
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Entry
EF888_00435 CDS
T05779
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
salo
Silicimonas algicola
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salo03019
]
EF888_00435 (rapZ)
Messenger RNA biogenesis [BR:
salo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EF888_00435 (rapZ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
SKI
nSTAND3
APS_kinase
CPT
AAA_22
AAA_28
CoaE
Zeta_toxin
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AZQ65730
UniProt:
A0A316G787
LinkDB
All DBs
Position
84308..85222
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AA seq
304 aa
AA seq
DB search
MTVERPSGIPARVVLLTGASGAGRTTTAHVLEDLGFETIDNLPISLLDRVLGGSAAMPPL
AVAIDVRNRDFSVDGVVAVLDRITASESAQAEVLYLDCRADVLLRRYSETRRRHPMAPSE
TPEIGIERELELLAPIRARADHLIDTSDMSPHDLRAEVERRFGPGVEGMMAISVESFSYK
QGLPRGIDMIFDVRFLANPHWEPALRALDGRDPEVAAFVEDDPRFGDFFRRVSELVISLL
PAFKDEGKTYLTVGLGCTGGQHRSVTVAERLAKALADNGWQVSTRHRELERRGLEPSPSV
GKSG
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgacagttgaacgtccctctgggattcccgcgcgcgtcgtgctgctgaccggcgcctcc
ggcgcggggcgtaccaccacggcccatgtgctcgaggacctcggcttcgagaccatcgac
aacctgccgatctcgcttctcgaccgtgtgctaggcgggtccgccgccatgccgcccctc
gccgtcgcgatcgacgtgcgaaaccgagacttctcggtcgatggcgtcgtggcggtgctg
gaccggatcaccgcgtcagagtccgctcaggccgaggtgctgtacctcgactgccgggcc
gatgtgctgctcaggaggtattccgagacgcgtcgacggcatccgatggcgccgtccgag
acgcctgagatcggcatcgagcgcgaactggagctcttggcgccgatccgtgcgcgcgca
gaccacctgatcgacacctcggacatgtcgccgcacgatctgcgcgccgaggtggaacgc
cgcttcgggccgggcgtcgagggcatgatggcgatctcggtcgagagcttcagctacaag
cagggcctgccgcgcggcatcgacatgatcttcgacgtgcgtttccttgccaacccgcac
tgggaaccggcgctgcgcgcacttgacggtcgcgacccggaggtcgcagccttcgtcgaa
gacgatccgcggttcggcgacttcttccgtcgcgtgtcggaactggtcatcagcctgctc
ccggccttcaaggacgaaggcaagacctatctgaccgtcggtctggggtgtacgggcggg
caacacaggtcggttaccgtggccgaaagacttgcaaaggcccttgcggacaacgggtgg
caggtgtcaactcgtcatcgggaacttgagcgacgaggattggaaccgtcgccgtctgta
gggaaatcgggttga
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