Silicimonas algicola: EF888_00570
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Entry
EF888_00570 CDS
T05779
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
salo
Silicimonas algicola
Pathway
salo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EF888_00570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salo03021
]
EF888_00570
03400 DNA repair and recombination proteins [BR:
salo03400
]
EF888_00570
Enzymes [BR:
salo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EF888_00570
Transcription machinery [BR:
salo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EF888_00570
DNA repair and recombination proteins [BR:
salo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EF888_00570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AZQ65754
UniProt:
A0A316G2H9
LinkDB
All DBs
Position
104596..104949
Genome browser
AA seq
117 aa
AA seq
DB search
MARVTVEDCVDKVPNRFELVMLAAHRAREIATGSPLTVDRDNDKNPVVSLREIADETQSA
EDLRERMIEANQTQIEVDEPEEDAMALLMGAESDKPVEDDLSEEKLLRALMEAQGQP
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgtgacggttgaagactgcgttgacaaggttccgaaccggttcgagctggtg
atgcttgccgcgcatcgggcgcgagagatcgcgacgggatcgcctctgacggtcgaccgg
gacaacgacaagaaccctgtcgtgagccttcgcgagatcgccgacgagacgcagtcggcc
gaggatctgcgcgagcggatgatcgaggcgaaccagacccagatcgaggtcgacgagccc
gaagaggacgccatggcgcttctgatgggcgccgagagcgacaagccggtcgaagacgac
ctgagcgaggaaaagcttcttcgcgccctgatggaagctcagggacagccgtag
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