KEGG   Silicimonas algicola: EF888_01340
Entry
EF888_01340       CDS       T05779                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
salo  Silicimonas algicola
Brite
KEGG Orthology (KO) [BR:salo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:salo03016]
    EF888_01340 (truB)
Enzymes [BR:salo01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     EF888_01340 (truB)
Transfer RNA biogenesis [BR:salo03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    EF888_01340 (truB)
 Prokaryotic type
    EF888_01340 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 DKCLD
Other DBs
NCBI-ProteinID: AZQ65897
UniProt: A0A316G1J1
LinkDB
Position
complement(253061..253966)
AA seq 301 aa
MARRKKGRDISGWLVVDKPAGPTSTAVVNKVRWAFDAKKAGHAGTLDPDATGLLAIALGE
ATKTVPFVTDALKAYDFTIRLGASTNTDDAEGEVTATSDTRPTDEEIRAALPAFTGDILQ
TPPAFSAVKIEGERAYTLARAGETVEIEARPLYVESLDLLARLDPDHAQLRMVCGKGGYV
RAIARDLGEALGCFGHVVTLRRTWAGPFDLDDAVTLDDVERLARTPELDELLLPLETGLA
DLPELPATAEGAARLRNGNPGMVIASDAEYGEMAWASYQGEAVAVGTYRAGELHPTRVFA
S
NT seq 906 nt   +upstreamnt  +downstreamnt
atggcacggcgcaaaaagggacgcgacatctcgggatggctggtggtggacaagcccgcc
ggaccgacctcgaccgccgtggtgaacaaggtcaggtgggctttcgacgcgaagaaggcc
ggccacgcaggcaccctcgaccccgacgcaaccggcctccttgccatcgcgctgggtgag
gcgaccaagacggtgcccttcgtcaccgacgcgctcaaggcctacgacttcacgatccgc
cttggcgcctccaccaacaccgacgacgccgagggcgaggtaacggccacctccgacacc
cgccccaccgacgaagaaatccgcgcggccctgcccgccttcaccggcgacatcctccag
acaccgcccgccttttccgccgtgaagatcgagggcgagcgcgcttatacgctcgcccgc
gccggcgagaccgtcgagatcgaggcgcgcccgctctacgtcgagagtctcgacctcctg
gcccgcctcgatcccgaccacgcacaactgcggatggtctgcggcaagggcggatatgtc
cgcgccatcgcccgcgaccttggagaagcgctcggctgcttcggccacgtcgtcacgctc
agacgcacctgggccgggccattcgatctcgatgacgctgtgaccctcgacgacgtcgaa
cgcctcgcccgcacgcccgagctcgacgagcttctcctaccgctcgagaccggacttgcc
gatctgcccgaattgcccgcgactgccgagggcgccgcgcggctcagaaacggcaatccc
ggcatggtgatcgcctccgacgcggaatacggcgagatggcctgggcctcctaccagggc
gaggctgtcgccgtcggcacctaccgcgcgggcgaactgcatccgacccgcgtcttcgcc
tcgtga

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