Silicimonas algicola: EF888_01690
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Entry
EF888_01690 CDS
T05779
Symbol
glgX
Name
(GenBank) glycogen debranching enzyme GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
salo
Silicimonas algicola
Pathway
salo00500
Starch and sucrose metabolism
salo01100
Metabolic pathways
salo01110
Biosynthesis of secondary metabolites
Module
salo_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
EF888_01690 (glgX)
Enzymes [BR:
salo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
EF888_01690 (glgX)
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Motif
Other DBs
NCBI-ProteinID:
AZQ65952
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Position
338339..340543
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AA seq
734 aa
AA seq
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MERHDTARDAKRRELGWTCSPIRRDIQEPLDVNPTRAKGAPTRLAHRSVAGGQPWPLGAT
FDGAGVNFAVFSAHAARVEVCLFTDDGRREIARLALPERDGDIWHGHVEGLTPGTRYGLR
VHGPYDPENGQRFNANKLLLDPYARQIVGRLKWSDALMGYRVGGAAGDLSFDTRDSAFAM
PKCVVADASFDWGDDRPPRHDLRGTVIYEANVRGLTMAHPGIDPSLRGTFLGMSSEPMID
HLTRLGVTAVQLLPIQSFLNDRFLEVRGLRNYWGYQTIGFFAPEPRYMSHEAVWEFQAMV
RRFHAAGIEVILDVVYNHSGEADQLGPTLSFRGIDNRSYYKLIGSGRDYENFTGTGNTLN
LDHPMVLRMVMDSLRYWVEVMHVDGFRFDLASALARGPEGFEPESAFLDALRQDPVLSRV
KLIAEPWDVGPDGYRLGRFPYPFLEWNDKFRDEVRRFWRGDPYGAAHLAKRLLGSAELFD
HGGRAAVSSVNFIACHDGFTLSDVVSYSHKRNEANGEDNRDGHNENQSENFGIEGPTDDA
DVIAARDLRRRNLLATLFLSQGTPMILGGDEVGNSQSGNNNAYAQDNETGWIDWSGADDG
FLRFVRRLIALRRAYPVLSQRRFLHGQRRGEDHPPDLEWRRADGATPTDDDWQNADWHSV
GVIIRESSEKALPKHETDVFAFFNAAGETSVWLPKGRWFRVLDTADPDAMPQACEGEVYL
ARHSVALFARDDGR
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggaacgccatgatacggcgcgcgatgcgaagcgacgtgagctgggttggacctgctcg
ccaatacgccgagatatacaggagcctctcgacgtgaatccgacccgtgcgaaaggggcg
ccgacacgactggcgcatcgttcggtcgcgggcgggcaaccctggcctctgggggcgacc
ttcgacggcgcaggcgtcaacttcgccgtcttttccgcccatgccgcgcgcgtcgaggtt
tgccttttcaccgatgacggccggcgcgagatcgcccggttggcgctccccgagcgggac
ggcgacatctggcacggtcatgtcgaggggctgacgccgggtactcgctacgggttgcgc
gtccacggcccctacgatcccgagaatgggcaacggttcaacgcgaacaagctcctgctc
gatccttacgcgcgccagatagtcgggcggctgaagtggtcggatgccctgatgggctac
cgcgtcggcggcgcggcgggggatttgtcgttcgacacccgcgacagcgccttcgccatg
ccgaagtgcgtggtggccgacgcaagcttcgactggggcgacgaccgcccgcctcgccac
gaccttcgcggcacggtgatctatgaggcgaacgtgcgtggcctgaccatggcgcacccc
ggcatcgatccgtcattgcgcggcacgttcctcggaatgagctccgagccgatgatcgat
cacctcacccgcctcggcgtcaccgcggtccagttgcttccgatccagtcctttctgaac
gaccgcttcctcgaggtgcgaggcctgcggaactattggggctaccagaccatcggcttc
ttcgcgcccgaaccgcgctacatgagccacgaggccgtgtgggaattccaggcgatggta
cgccgcttccacgccgccgggatcgaggtcatcctcgacgtggtctacaaccactcgggc
gaggcggaccagcttggcccaacgctcagtttccgtggcattgacaatcgaagttactac
aagctgatcggctctgggcgcgactatgagaacttcacgggcaccggcaatacgctgaac
ctcgaccatccgatggttcttcggatggtgatggattcgctgcgctactgggtcgaggtc
atgcacgtcgacggcttccgcttcgacctcgccagtgcgcttgctcgaggaccggagggc
ttcgagccggagtctgcctttctcgacgcactgaggcaggaccccgtgctgtcgagggtc
aaactgatcgccgagccttgggacgtagggccggacggctatcgcctgggtcgattcccc
tatcccttcctggaatggaacgacaagtttcgcgacgaggtgcggcgcttctggcgtggc
gatccttacggcgcggcccatctcgcgaagcgccttctggggtcggctgaactgttcgac
cacggtggacgcgcggcggtctcgtcagtcaacttcatagcctgccacgacggcttcacg
ctgtccgatgtcgtcagctacagccacaagcgcaacgaggccaacggcgaggacaaccgc
gacggtcacaacgagaaccagtccgagaacttcggcatcgaaggtccgaccgacgatgcg
gacgtgatcgcagcgcgcgacctgagacggcgcaacttgctggcgacgcttttcctgtcg
cagggcacacccatgatcctcggcggcgacgaggtcggcaacagccagtccggcaacaac
aacgcttatgcccaggacaacgagacgggctggatcgactggagcggcgccgacgacggt
ttcctgaggtttgtgcggcgcctgatcgccttgcggcgcgcctatccggtgctgtctcag
cggcggttcctgcacggtcagcggcgcggcgaggatcacccgcccgacctggaatggcgc
cgcgccgatggcgcaactccgacggacgacgactggcagaacgcggactggcactcggtt
ggggtgattatccgcgagtcgtcggaaaaggccttgccgaagcacgaaacggatgttttt
gccttcttcaacgcggcgggcgagacttcggtctggttgcccaagggcaggtggttccgc
gtgcttgatacggcggatcccgatgcaatgcctcaggcttgcgaaggtgaggtctacttg
gcgcgacactcggtggctctgttcgcgcgcgacgatggacgatga
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