Silicimonas algicola: EF888_01770
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Entry
EF888_01770 CDS
T05779
Symbol
rhaS
Name
(GenBank) rhamnose ABC transporter substrate-binding protein
KO
K10559
rhamnose transport system substrate-binding protein
Organism
salo
Silicimonas algicola
Pathway
salo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EF888_01770 (rhaS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
salo02000
]
EF888_01770 (rhaS)
Transporters [BR:
salo02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
EF888_01770 (rhaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
AZQ65964
UniProt:
A0A316GCC4
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All DBs
Position
complement(356755..357753)
Genome browser
AA seq
332 aa
AA seq
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MSITRRLLGGSALAAMILAGSMAQAQDKVRIALVVKALGIGFFEAAAEGAEEAAAELGNV
EIIYTGPTDTTAEGQIEVINSLIAQQVDAIAISANDPDALVPALKKAMDRGITVISWDSG
VAPEGREMHLNPSSNALIGNMIIKLAADELPDGGKVAVLSASATATNQNTWIAEMEKVMG
DYPNIEVVGTVYGDDLADKSYREAQGLMQTYPDLKAIIAPTSVGIVAAAKAVEDAGKAGE
INVTGLGLPSEMAGAIQSGASKSFAIWNPIDLGYSATMLAYNLATDAAEAGPGAEIPMGR
MGTLTLDDNAEGAMADPFVYDASNIDQFKEIF
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcaccagaagactactgggcggcagcgccctcgcggccatgatcctggccgga
agcatggcgcaggcgcaggacaaggtgcgcatcgccctcgtcgtcaaggcgcttggcatc
ggcttcttcgaagccgcggcggaaggcgccgaggaagccgcggcagaactcggcaacgtc
gagatcatctataccggcccgaccgacaccacggccgaaggccagatcgaggtcatcaac
agcctgatcgcacagcaggtcgacgccatcgcgatctcggccaacgaccccgacgccctg
gtccccgcgctgaagaaggcgatggaccgcggtatcactgtcatatcgtgggattcgggc
gtggcgcccgaggggcgcgagatgcacctcaacccgtcgtccaacgctctgatcggcaac
atgatcatcaagctcgccgcagacgaactgccggacggcggcaaggtcgccgtgctctcc
gcctcggccaccgcgacgaaccagaacacctggatcgccgagatggaaaaggttatgggc
gactaccccaatatcgaagtggtcggcaccgtctacggcgatgacctcgccgacaagtcc
taccgcgaagcgcagggattgatgcagacctaccccgacctgaaggcgatcatcgcaccg
acctccgtcggcatcgtcgccgccgcgaaggcggtcgaggacgcgggcaaggcgggggag
atcaacgtcacgggcctgggccttccgtccgagatggcaggcgccatccagtcgggcgcg
tccaagtccttcgcgatctggaaccctatcgacctcggctactcggccacgatgctggcc
tataacctggccaccgacgccgccgaggcgggcccgggcgccgagatccccatgggtcgg
atgggcacgctgacactggacgacaacgccgagggggcgatggccgatcccttcgtctac
gacgcctcgaacatcgaccagttcaaggaaatcttctga
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