Silicimonas algicola: EF888_02720
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Entry
EF888_02720 CDS
T05779
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
salo
Silicimonas algicola
Pathway
salo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EF888_02720 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salo03019
]
EF888_02720 (groL)
03110 Chaperones and folding catalysts [BR:
salo03110
]
EF888_02720 (groL)
03029 Mitochondrial biogenesis [BR:
salo03029
]
EF888_02720 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salo04147
]
EF888_02720 (groL)
Enzymes [BR:
salo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
EF888_02720 (groL)
Messenger RNA biogenesis [BR:
salo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
EF888_02720 (groL)
Chaperones and folding catalysts [BR:
salo03110
]
Heat shock proteins
HSP60 / Chaperonin
EF888_02720 (groL)
Mitochondrial biogenesis [BR:
salo03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
EF888_02720 (groL)
Exosome [BR:
salo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EF888_02720 (groL)
Exosomal proteins of other body fluids (saliva and urine)
EF888_02720 (groL)
Exosomal proteins of breast cancer cells
EF888_02720 (groL)
Exosomal proteins of colorectal cancer cells
EF888_02720 (groL)
Exosomal proteins of bladder cancer cells
EF888_02720 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AZQ66134
UniProt:
A0A316GGC2
LinkDB
All DBs
Position
544445..546082
Genome browser
AA seq
545 aa
AA seq
DB search
MAAKDVRFDTDARNRMLKGVNTLANAVKVTLGPKGRNVVLEKSFGAPRITKDGVTVAKEI
ELEDRFENMGAQMVKEVASRTNDEAGDGTTTATVLAQALVTEGMKSVAAGMNPMDLKRGI
DLAVSKVVAAIKAAARDVTDSAEVAQVGTISANGESEIGRQIADAMQKVGNDGVITVEEN
KGLETETEVVEGMQFDRGYLSPYFVTNPEKMSAELDDCLILLHEKKLSSLQPMVPLLESV
IQSQKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQV
ISEDLGMKLESVTLDMLGSAKRVLIKKDDTTIIDGGGEKAEIEARVSQIRQQVEETTSDY
DREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALV
QAGKKLDGVKGENSDQDAGIAIVRRALEAPLRQIAENAGVDGAVVAGKIRESSDLSFGFN
AQTEEYGDLFKFGVIDPAKVVRTALEDAASIAGLLITTEAMVADRPQKESAGGGMPDMGG
MGGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaggacgtcagattcgataccgatgcccgtaaccgcatgctgaagggtgtg
aacacccttgcaaacgcggtaaaagtcacgctcggcccgaaaggccgcaacgtggtgctt
gagaaatccttcggcgctccgcgcatcaccaaagacggtgtgacggttgcgaaggaaatc
gaactggaagaccggttcgagaacatgggcgcgcagatggtgaaagaagtcgcctctcgc
accaatgacgaagccggcgacggcaccaccaccgccaccgtgctggcccaggctctcgtg
accgagggcatgaagtcggtcgcggccggcatgaacccgatggacctcaagcgggggatc
gacctcgccgtctcgaaggtcgtcgcagccattaaggccgctgcccgtgacgtgaccgac
agcgccgaagtcgcgcaggtcggcaccatttcggccaacggcgaaagcgagatcggccgc
cagatcgccgacgcgatgcagaaggtcggcaacgacggcgtcatcaccgtcgaagagaac
aagggcctcgagaccgagaccgaggtcgtcgaaggcatgcagttcgaccgcggctatctc
tcgccctacttcgtgaccaaccccgagaagatgtccgccgagctggacgactgcctcatc
cttctccacgagaagaagctgtcgtcgcttcagccgatggttccgctgctcgagtcggtc
atccagtcgcagaagccgctcctcatcatcgccgaggacgtcgagggcgaggctctggcc
acgctcgtcgtgaacaagctgcgcggcggcctgaagatcgccgccgtcaaggcgccgggc
ttcggcgatcgtcggaaggccatgcttcaggacatcgcgatcctgacgggcggccaggtg
atctcggaagacctgggcatgaagctcgagagcgtcacgctcgacatgctgggttccgcc
aagcgcgtcctgatcaagaaggacgacaccaccatcatcgacggtggcggcgagaaggcc
gagatcgaggcccgcgtctcgcagatccgtcagcaggtcgaggaaaccacctcggactat
gaccgcgagaagctgcaggagcgtgttgcgaagctggcgggcggcgttgccgtcatccgc
gtcggcggcatgaccgagatcgaggtgaaggagcgcaaggaccgcgtcgacgacgcgctg
aacgcgacccgcgctgcggtccaggaaggcatcgtcgtcggcggcggcgtggctctggtt
caggctggcaagaagctggatggcgtcaagggcgagaacagcgaccaggacgcgggcatt
gccatcgtccgccgtgcgctcgaagctccgctgcgtcagatcgccgaaaacgcgggcgtc
gacggcgcggtcgttgccggcaagatccgggaatcctcggacctgtccttcggcttcaac
gctcagaccgaagagtatggcgacctcttcaagttcggcgtgatcgaccccgcgaaggtc
gtccgcaccgcactcgaggacgccgcgtccatcgcgggcctgctcatcaccaccgaagcg
atggtggcggaccggccgcagaaggaatccgctggcggcggcatgcccgacatgggcggc
atgggcggcatgatgtaa
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