Silicimonas algicola: EF888_04015
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Entry
EF888_04015 CDS
T05779
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
salo
Silicimonas algicola
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salo03400
]
EF888_04015
Enzymes [BR:
salo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
EF888_04015
DNA repair and recombination proteins [BR:
salo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
EF888_04015
Prokaryotic type
EF888_04015
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AZQ66369
UniProt:
A0A316GCN6
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All DBs
Position
782715..784124
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AA seq
469 aa
AA seq
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MAAPAIWWVRKDLRLGDNAALTDAARLGPVLPVFILDEVFQEYGACPLWRFGLGVAHLAR
TLEAAGSRLILRRGPAADVLSGLCRETGAAAVRWSRAYDPDQVARDRGVKAALDEQGIDA
ASLPGHVLFEPWTVETGGGGYYKVYSPFWRSVRDRDVGRQLPRPDFAVPVRWPESETLED
WNLAGPMRRGADVVEPHLTVGEDRAASRLDAFVVHRLDGYKESRDVVAEDGTSGLSENLA
WGEISPRACWHAGMQAVDDGRAGAETFLKELAWREFGYHLVWHTPRLVSANWREGWDSFP
WNEDERRAEVTAWTQGRTGVAFVDAAMREMFVTGRMHNRARMIVASYLTKHLMAHWRIGQ
RWFEHCLCDWDPASNALGWQWTAGSGPDAAPYFRIFNPQTQADRFDPKGVYRDRWIAEGR
DAPTETALSYFDSIPKRWGMSPGDAYPEPVVALDEGRARALAAYEKRNF
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaccggcgatctggtgggtccggaaggatcttcggctgggcgacaacgcggca
ctgaccgacgccgcgagactgggcccggtcctgccggtcttcatcctggacgaggttttt
caagagtacggcgcctgccctctgtggcggttcggcctcggcgtcgcgcatctggcgcgg
acgctcgaagcggcgggatcgcggctgatcctgcggcgtgggccggcggcggacgtcctg
tccgggctctgccgcgagaccggagcggcggcggttcggtggagcagggcctatgacccg
gatcaggtcgcgcgcgacaggggcgtgaaagcggcgctggacgagcaggggatcgacgcc
gcgagcctccccggccacgttctcttcgagccatggaccgtcgagaccggcgggggcggc
tactacaaggtctactcgccgttctggcggtcggtccgcgaccgcgacgtgggccggcag
cttccccgcccggatttcgccgtgcccgtccgctggccggagagcgagacgctggaggac
tggaacctcgcgggaccgatgcgtcgtggtgcggacgtcgtcgagccgcacctgaccgtc
ggcgaggatcgcgcggcgtcccgtctcgacgctttcgtcgtgcatcggctggacggctac
aaagagagccgcgacgtcgtggccgaggatgggacatcgggcctgtccgagaacctcgcc
tggggcgagatttcgccacgcgcctgctggcacgcggggatgcaagcggtcgatgacggc
agggcgggcgccgagaccttcctgaaggagctggcctggcgcgagttcggctatcacctc
gtatggcacacaccccgcctcgtaagcgccaactggcgcgaggggtgggacagctttccc
tggaacgaggacgagcggcgcgccgaggtgacggcctggacgcaggggcgcacgggtgtg
gccttcgtggatgccgcgatgcgcgagatgttcgtgacggggcggatgcacaaccgggcg
cggatgatcgtagccagctatctgaccaagcatctgatggcacactggcggatcgggcag
cgctggttcgagcactgcctttgcgactgggatccggcgtccaatgcgctcggctggcaa
tggacggccggatcgggacctgacgcggcgccctacttccgcatcttcaatccccagacg
caggccgaccgcttcgatcccaagggcgtctatcgagaccgctggatcgccgaagggcgc
gacgcgccgaccgaaacggcgctgtcctatttcgactcgatcccgaagcggtggggcatg
tcgcccggcgatgcctaccctgagcccgtcgtcgcactggacgagggcagggctcgggcg
cttgcggcctacgagaaacgcaacttctga
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