Silicimonas algicola: EF888_04110
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Entry
EF888_04110 CDS
T05779
Symbol
ruvA
Name
(GenBank) Holliday junction branch migration protein RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
salo
Silicimonas algicola
Pathway
salo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EF888_04110 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salo03400
]
EF888_04110 (ruvA)
DNA repair and recombination proteins [BR:
salo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EF888_04110 (ruvA)
RecFOR pathway proteins
EF888_04110 (ruvA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RuvA_N
RuvA_C
HHH_5
RecR_HhH
DBC1
Motif
Other DBs
NCBI-ProteinID:
AZQ66386
UniProt:
A0A316GH53
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Position
802208..802861
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AA seq
217 aa
AA seq
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MIGRIAGRIDHRGADHVLIDVKGVGYVVHVSDRTLAGLPPVGEAAALYTELLVREDLLQL
FGFPTLVEKEWHRLLMGVQGIGAKASMAILGTLGPDGVARAIALGDWNAIKAAPGVGPKI
AQRAVNELKGKAPAMMALGTGGAPRLPDDDGEVIETAPRPAAPVNASAQAEALSALQNLG
YAPGEAAGAVAEAAGADPDADTTVLIRAALRRLAPKG
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgatcgggcgcatcgcagggcggatcgaccaccgcggcgcggaccacgtcctgatcgac
gtgaagggcgtgggttatgtcgtccacgtcagcgaccgcacgcttgccggccttccgccc
gtaggtgaggcggctgcgctttataccgagttgctcgttcgggaggatctccttcaactt
ttcggatttccgaccctggtcgagaaggaatggcacaggcttcttatgggagtgcaaggg
atcggcgcgaaggcgtccatggccatcctcggcaccctcggacccgacggggtcgcccgc
gccatcgcccttggcgactggaacgcgatcaaggcggcgccgggcgtcggcccgaagatc
gcacagcgggcggtgaacgagttgaagggcaaggcgccggcgatgatggcgcttggcacg
ggcggcgccccgcggctgcccgacgacgacggcgaggtgatcgagaccgccccccgccct
gccgcgccggtcaacgcctccgcgcaggccgaggcgctgtcggcgctccagaaccttgga
tatgcgccgggcgaggcagcgggcgcggtggccgaggcggcgggtgccgatcccgatgcg
gataccacggtcctgatacgtgccgccctccggcgcctggcgccgaagggatga
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