Silicimonas algicola: EF888_04305
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Entry
EF888_04305 CDS
T05779
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
salo
Silicimonas algicola
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
salo03016
]
EF888_04305 (truA)
Enzymes [BR:
salo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
EF888_04305 (truA)
Transfer RNA biogenesis [BR:
salo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EF888_04305 (truA)
Prokaryotic type
EF888_04305 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AZQ66423
LinkDB
All DBs
Position
complement(836317..837084)
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AA seq
255 aa
AA seq
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MPRYAFRIEYLGSPFSGWQRQDHAPSVQGRIEAALARLEPGLPSLAAAGRTDAGVHATGQ
VAHIDMTRDWDPFRLSEALNHHLRPDLVAITACARVPDDFHARFSAVERRYLYRIALRRA
PLVFDQGQAWRIRRDLDIAAMREGAAYLVGNHDFTTFRSTMCQARSPVKTLDEIAISTRP
AEAGTIVEIRLRARSFLHNQVRSIVGTLERVGAGTWTPDRVKDALDARDRAACGPVAPPD
GLFLTDVLYETNPFA
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgccacgctacgccttcaggatcgagtatctgggcagccccttttcgggctggcagcgg
caggaccacgccccctcggtgcaagggcgcatcgaagcggcgctcgcacggctcgagccc
ggccttccctctctcgccgccgcaggacggacggacgccggcgtccacgcgacgggtcaa
gtcgcgcacatcgacatgacgcgggattgggaccccttccgtctgtccgaggcgctgaac
caccacttgaggccggacctcgtggcgatcaccgcctgcgcgcgcgtccccgacgacttc
cacgcccgcttctcggccgttgaacggcgctacctctaccgcatcgccctgcgccgcgcg
cctctcgtcttcgatcagggccaggcctggcgcatccggcgcgacctcgacatcgccgcc
atgcgcgagggcgcggcgtatttggtgggcaaccacgacttcaccaccttccggtcgacc
atgtgccaggccaggagcccggtgaagacgctggacgaaatcgccatctctacccgcccc
gccgaggccggcacgatcgtcgagatccgcctccgtgcgcggtcgtttctccacaaccag
gtccggtccatcgtgggaacactcgaacgggtcggcgccggcacctggacgcccgaccgc
gtcaaggacgcgctcgatgcccgcgaccgtgccgcctgcggtccggtcgcgccacccgac
ggcctgttcctgaccgacgtgctctacgagaccaaccccttcgcctga
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