Silicimonas algicola: EF888_04955
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Entry
EF888_04955 CDS
T05779
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
salo
Silicimonas algicola
Pathway
salo00521
Streptomycin biosynthesis
salo00523
Polyketide sugar unit biosynthesis
salo00541
Biosynthesis of various nucleotide sugars
salo01100
Metabolic pathways
salo01110
Biosynthesis of secondary metabolites
salo01250
Biosynthesis of nucleotide sugars
Module
salo_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
EF888_04955 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EF888_04955 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EF888_04955 (rfbC)
Enzymes [BR:
salo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
EF888_04955 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
DUF3319
Motif
Other DBs
NCBI-ProteinID:
AZQ66545
UniProt:
A0A316GG16
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All DBs
Position
complement(978872..979429)
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AA seq
185 aa
AA seq
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MIVSETALPGALVIEPARHGDHRGFFSESWSRRRMEEAGIDLDFVQDNHSLSTEVCTLRG
LHYQAPPHAQAKLVRCGRGSLTDVIVDVRNGSPTYGQSLSVDLSFDNGRQVLVPIGFLHG
FITREPNTEIVYKVSDYYSADCDGAVRWDSCGIDWSCDTDPIISPKDAEAVPFSDWQSPF
EWTGA
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcagtgaaacagcccttcccggcgccctggtcatcgagccggcacgacacgga
gaccaccggggctttttctcggaatcctggagccgccgccgcatggaagaggccgggatc
gacctcgacttcgtgcaggacaatcattccctttcgaccgaggtctgcaccctgcgcggc
ttgcactaccaggccccgccccacgctcaggcaaagctggtgcgctgcgggcgcggatcg
ctgaccgacgtgatcgttgacgtgcgtaacggctcaccgacctacggacagtctctgtct
gtcgacctcagcttcgacaacgggcggcaagttcttgtcccgattggatttctgcacgga
ttcatcacgcgcgagccgaataccgagatcgtctacaaggtaagcgattactattccgcc
gactgcgacggcgcagtccggtgggactcctgcggcatcgactggtcctgcgacaccgac
ccgatcatctcgcccaaagacgccgaagctgtgcccttctcggactggcaaagccccttc
gagtggaccggcgcatga
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