Silicimonas algicola: EF888_05035
Help
Entry
EF888_05035 CDS
T05779
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
salo
Silicimonas algicola
Pathway
salo00300
Lysine biosynthesis
salo00470
D-Amino acid metabolism
salo01100
Metabolic pathways
salo01110
Biosynthesis of secondary metabolites
salo01120
Microbial metabolism in diverse environments
salo01230
Biosynthesis of amino acids
Module
salo_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EF888_05035
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EF888_05035
Enzymes [BR:
salo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
EF888_05035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
AZQ69585
LinkDB
All DBs
Position
994232..995014
Genome browser
AA seq
260 aa
AA seq
DB search
MKMHGLGNDFVVIDLREGGAPVTEDVARALGDRHRGVGFDQLAVMHSDPEAAVRLVFYNA
DGSLSAACGNATRCIARHLMDETGQGALRIRTERGLLACEDAGHGMTRVNMGQPDTEWRA
VPLSREVDTLHLPIEGDPVATGMGNPHCTFFVEDAEAVDLARRGPVLENHLLFPERTNVQ
FASVTGRDRLRMRVWERGTGITLASGSSSCAVAVAAARRGLTGRTVTLDLDGGRIEIDWR
DDGVWMTGPTAHVFDGVWRG
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgcatgggcttggcaacgacttcgtcgtgatcgacctccgcgagggcggagcg
ccggtgaccgaggacgtggcgcgcgcgcttggcgaccgtcaccggggcgtgggcttcgac
cagctcgcggtgatgcattccgaccccgaggcggcggtgcggctggtgttctacaacgcc
gacggctcgctttcggccgcctgcggaaacgccacgcggtgcatcgcgcggcacctgatg
gacgagacggggcagggcgccctgaggatccgcaccgagcgcgggcttctggcctgcgag
gacgcgggccacggcatgacacgggtcaacatggggcagccagacaccgagtggcgcgcg
gttccgctgtctcgcgaggtcgacacgctgcacctgccgatcgagggcgatccggtggcg
accggcatgggcaatccgcattgcaccttcttcgtcgaggatgccgaggcggtggacctc
gcccggcggggcccggtactcgagaaccacctcctgttccccgagcgcacaaacgtgcag
ttcgcctcggtcacgggacgcgaccgcctgcggatgcgggtctgggagcggggcacgggc
atcactctcgcctccggctcgtcctcctgcgcggtggccgtcgcggcggcgcggcggggg
ctgacggggcgaaccgtcacgctcgatctcgacggtgggcggatagagatcgactggcgg
gacgacggggtctggatgacagggccgaccgcgcatgtgttcgacggcgtgtggagaggc
tga
DBGET
integrated database retrieval system