Silicimonas algicola: EF888_05970
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Entry
EF888_05970 CDS
T05779
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
salo
Silicimonas algicola
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salo03000
]
EF888_05970
Transcription factors [BR:
salo03000
]
Prokaryotic type
Helix-turn-helix
LacI family
EF888_05970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
LacI
HTH_31
HTH_26
HTH_3
HTH_Crp_2
HHH
Xre-like-HTH
DSHCT
MFD_D3
Motif
Other DBs
NCBI-ProteinID:
AZQ66726
UniProt:
A0A316FWH7
LinkDB
All DBs
Position
1191761..1192819
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AA seq
352 aa
AA seq
DB search
MDEKSEPADLLGILRPTTKDLARVAGVSRATVDRVLNGRDGVRPDTVKKVNAAIRDLGFV
RNLSAANLAKGKSYRFLFVLPRSGDQFLEEIHRHIAEANTLYTSEMIRANVHQIEEHDPH
RIAGYLSSLSSQDVDGVAIMAPETPQVRDAITRLRERGVCALPFISNQALSGGNWVGIDN
RAAGCTAGTLLGRFIHAAQGKILVVAESMQSRDSLERRLGFDEVMNNQFHNLTPLPTIET
YGSAERAQRVVRAAIDRNPEIVGVYILASEARIPGEVLEAARFVEPVVAIAHERTPFTSA
ALTSGLLDAVITQDPGHLVRSAIRRLRAMTDNLTTLNSQERIRIEVLLQTNL
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaaatctgaacctgccgaccttttgggcattctgcgaccgacaacgaaggat
ctggcccgtgtggccggagtaagccgcgcgacagtcgatcgcgttctcaatgggcgcgac
ggcgtgagacccgacacggtcaagaaggtcaatgctgcgatcagggacctgggcttcgtc
cgcaacctctcggcggcaaacctcgcgaagggcaaaagctaccggttcctgttcgtcctg
ccccggtcaggcgaccagtttctggaggagatccaccgtcacatcgccgaagccaacacc
ctctacacgtccgagatgatccgcgcgaacgtgcaccagatcgaagagcatgacccacat
cggatcgctggatatctgtccagtctatcttcgcaggacgtcgacggcgtggcgatcatg
gcacccgaaacgccgcaagtgcgcgacgcgatcacgaggctgcgtgagcgtggcgtctgc
gctttgccattcatttccaatcaggcgctgtccggcggcaactgggtcgggatcgacaac
cgcgccgccggttgcacggccggcactctgctgggccgattcatccatgcggcgcaaggc
aagatcctcgtcgtggctgagagcatgcaatcgcgcgacagccttgaacgacgccttgga
tttgacgaggtgatgaataaccagtttcacaatctgacaccgctacccacgatcgagacc
tacggttccgcagaacgcgcgcaacgtgtcgtgagagctgccatcgaccgaaatccagag
atcgtcggagtctacatcctggcctcggaagcccggataccgggcgaggttttggaggct
gcgcgctttgtcgagcctgtcgttgccatagctcacgaacgaaccccatttacgtcggca
gctctcacgtccggactgctcgatgcggtcataacgcaggatccgggccatcttgtccga
agcgcaattcgccggctacgcgccatgaccgacaacctcaccacgttgaattcccaggaa
aggatacgtatcgaggtgttgctccaaacgaacctgtaa
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