Silicimonas algicola: EF888_06660
Help
Entry
EF888_06660 CDS
T05779
Symbol
gatB
Name
(GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
salo
Silicimonas algicola
Pathway
salo00970
Aminoacyl-tRNA biosynthesis
salo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
EF888_06660 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
salo03029
]
EF888_06660 (gatB)
Enzymes [BR:
salo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
EF888_06660 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
EF888_06660 (gatB)
Mitochondrial biogenesis [BR:
salo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
EF888_06660 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
Aconitase_B_N
Motif
Other DBs
NCBI-ProteinID:
AZQ66847
UniProt:
A0A316G4J6
LinkDB
All DBs
Position
complement(1326903..1328414)
Genome browser
AA seq
503 aa
AA seq
DB search
MLDLTYEAPKPRVIAGATGDWELVIGLEVHAQVASKAKLFSGASTQFGAEPNSNVAFVDA
AMPGMLPVINEGCVALAVKMGLGLKAKINLTSAFDRKNYFYPDLPQGYQISQLYHPIVGE
GEVIVDMAPGVARRVRIERIHLEQDAGKSIHDMDPHMSFVDLNRTGVALMEIVSRPDIRG
PEEAAAYVVKLRQILRYLGTCDGNMQNGNLRADVNVSVCRPGDYEKYQATQDFSHLGTRC
EIKNMNSMRFIQQAIEYEARRQIALLEDGKSVIQETRLYDPDKGETRSMRSKEEAHDYRY
FPCPDLLPLEIEQAWVDEIAASLPELPDAKKVRFVTDFGMTEYDASVLTADVESAAYFEE
VARGRDGKAAANWVINELFGRLKKEGHEIGESPMTARQLGGILDLIASDAISGKIAKELF
EIVYTEGGDPAAIVEARGMTQVTDTGAIEAAVDEVIAANPAQVEKAKANPKLAGWFVGQV
MKATGGKANPAAVNQIVAARLGL
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacctgacctacgaggctccgaagccaagggtgatcgcaggcgccacgggtgac
tgggaactggtgatcggcctcgaagtccacgcgcaggtcgcctcgaaggcgaagctcttt
tcgggcgcgtcgacgcaattcggcgcggagccgaactcgaacgtggctttcgtcgatgcc
gcgatgcccggaatgcttcccgtcatcaacgagggctgcgtggcgctggccgtgaagatg
gggctggggctgaaggcgaagatcaacctcacctcggccttcgaccgcaagaactacttc
tacccggacctgccgcagggctaccagatcagccagctttaccaccccatcgtgggcgag
ggagaggtcatcgtcgacatggcccccggcgtcgcgcgccgcgtgcggatcgagcgcatc
cacctcgagcaggacgcgggcaagtcgatccacgacatggatccgcacatgtccttcgtc
gacctgaaccgcaccggcgtggccctgatggagatcgtcagccgacccgacatccgcggg
ccggaagaggcggcggcctatgtcgtcaagctgcgccagatcctgcgctatctcgggaca
tgcgacgggaacatgcagaacggcaacctgcgcgccgacgtgaacgtctcggtatgccgg
cccggagattacgagaagtaccaggcgacacaggacttctcgcacctcggcacgcgctgc
gagatcaagaacatgaactcgatgcgcttcattcagcaggccatcgagtacgaggcgcgc
cgccagatcgcgcttctggaagacggcaagtccgtcatccaggaaacgcgtctctacgac
cccgacaagggcgagacgcggtcgatgcggtcgaaggaagaggcgcacgactaccgctat
ttcccttgcccggacctcctcccgctcgagatcgagcaggcctgggtcgacgaaatcgcc
gcctcgctgcctgaactgcccgacgcgaagaaggtccgcttcgtgacggacttcggcatg
accgaatacgacgcgagcgtcctgaccgccgatgtcgaaagtgccgcgtacttcgaagag
gtcgcgcggggccgcgacggcaaggcagcggcgaactgggtcatcaacgaactcttcggc
cggctgaagaaggaaggccacgagatcggcgaaagtccgatgacggcccggcaactgggc
ggcatcctggatctgatcgcttccgacgcaatttccggcaagatcgccaaggagctgttc
gagatcgtgtacacggaagggggcgatccggccgccatcgtcgaggcgcgcggcatgacc
caggttaccgacacgggcgccatcgaggcggcagtcgacgaggtgatcgcggcgaacccc
gcgcaggtggagaaggccaaggccaatcccaagcttgcaggctggttcgtgggccaggtg
atgaaggcgacgggcggcaaggcaaaccccgccgccgtcaatcagatcgtcgcagcgcgg
ctggggctctag
DBGET
integrated database retrieval system
