Silicimonas algicola: EF888_06765
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Entry
EF888_06765 CDS
T05779
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
salo
Silicimonas algicola
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
salo03009
]
EF888_06765
Enzymes [BR:
salo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
EF888_06765
Ribosome biogenesis [BR:
salo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EF888_06765
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AZQ66866
UniProt:
A0A316G2Q4
LinkDB
All DBs
Position
complement(1350692..1351231)
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AA seq
179 aa
AA seq
DB search
MTLILFNKPWGVLSQFTDAKSPSPRPTLSTFGLPAGVYPAGRLDRDSEGLLMLTDDGRLQ
ARIASPTARTEKTYLVQIEGDPLDADLDPLRRGVMLKDGPTRAARVRLIDPPDLWLRDPP
VRVRLSVPDRWIEVTLTEGRNRQVRRMTAAVGLPTLRLVRWRIGDWTLDGLAPGEWREI
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgatcctgttcaacaagccctggggcgtgctcagccagttcaccgacgcgaaa
tcgccctcgccccgcccgacgctgtcgacgttcggcctgcctgcgggcgtgtatcccgcc
gggcgcctcgaccgcgattccgaagggctgcttatgctcaccgacgacgggcgccttcag
gcacggatcgcgtcgccgactgcccggacagagaagacctacctcgtccagatcgaaggc
gatccgctggacgccgatctcgatccgctgcgcaggggcgtgatgctgaaggacggaccg
acacgggcggcgcgcgtccgtctcatcgacccgccggatctgtggctgcgggacccgccc
gtgagggtccggctatcagtgcctgaccgatggatcgaggtcaccctcaccgagggccgg
aaccgccaggtccggcgcatgacggccgccgtcgggcttcccacgctgcgcctcgtgagg
tggcggatcggcgactggacgctggacggactggcccccggagagtggcgcgagatctga
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