Silicimonas algicola: EF888_07095
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Entry
EF888_07095 CDS
T05779
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
salo
Silicimonas algicola
Pathway
salo03030
DNA replication
salo03430
Mismatch repair
salo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EF888_07095
03430 Mismatch repair
EF888_07095
03440 Homologous recombination
EF888_07095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salo03032
]
EF888_07095
03400 DNA repair and recombination proteins [BR:
salo03400
]
EF888_07095
Enzymes [BR:
salo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EF888_07095
DNA replication proteins [BR:
salo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EF888_07095
DNA repair and recombination proteins [BR:
salo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EF888_07095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
AAA_22
AAA_5
AAA_33
NPHP3_N
nSTAND3
Mg_chelatase
NTPase_1
Hydrolase
AAA_14
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AZQ66926
UniProt:
A0A316G2X0
LinkDB
All DBs
Position
complement(1417398..1418513)
Genome browser
AA seq
371 aa
AA seq
DB search
MSDDLPAEADRADGAPHPRETAHLFGQGDAEAAFLEAVAQDRLHHAWLLTGPKGVGKATL
AWRLARFLLAEAPADAGFFGDAPPTPTSLDIPRDHPVARRIAALSEPGLLLIRRAWDSDR
KKLKSQITVDEVRKLNEFFGLTATDGGRRIVIVDAADELNPSAANALLKVLEEPPKRAVL
ILVSHQPARLLPTIRSRCRTLRLGEVGPEDMARALSQAGVTPEDGLALSELAQGSVGEAI
RLLSQDGPGLYATIVRLISGGPRMDRQALRAFAENVTVRGAEERQDLAVRLLNLALVRLA
RTGAGRPPLAEAAPGEIEAWRRLAPDAGRAQVWATLQQELSSRIAHGRAVNIDAQSLLTD
AFLRIDEAARD
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgaccttccggccgaagcggatcgcgcggatggcgcgccccacccgcgcgag
accgctcaccttttcggacagggtgacgcggaggccgcgtttctcgaggccgtcgcgcag
gaccggctgcatcacgcctggcttctgacggggcccaagggcgtcgggaaggcgaccctc
gcgtggcggctggcgcgtttccttctggccgaggctcctgccgacgccggcttcttcggc
gacgcgccccctacccccacgtctctggacatcccgcgggaccatcccgtcgcgcgacgc
attgcggccctgtccgaaccgggcctcctcttgatccgccgcgcctgggacagcgaccgc
aagaagctgaagtcgcagatcaccgtcgacgaggtgcggaaactgaacgagttcttcggc
ctcaccgcgacggatggcggacggcgcatcgtcatcgtggatgcagcggacgagttgaac
ccctcggccgcgaatgcgcttctgaaggttctcgaggaaccgcccaagcgggcggtcctg
atcctcgtcagccaccagcctgcccgtctccttccgacgatccggtcgcgctgccggacg
ctgcggcttggcgaggtcgggcccgaggacatggcgcgggccctgtcgcaggccggagtg
acgcccgaggacgggctggctctgagcgagcttgcccaaggctcggtcggcgaggcgatc
cggcttctctcgcaggacgggccgggcttgtatgcaacgatcgtgaggctgatctcgggt
ggtccccggatggaccgtcaggccttgcgcgcctttgcagagaacgtgaccgtccgcggg
gcagaggaacgccaggaccttgccgtccgacttctcaacctcgccctggttaggcttgcg
cggaccggcgcgggccgacctcccctcgccgaggccgcaccgggcgagatcgaggcttgg
cgccgcctcgcgcccgatgctggccgcgcgcaggtctgggcgacgcttcagcaggagttg
tcgtcgcgcatcgcgcacggccgggccgtgaacatcgacgcgcaaagtcttctgaccgac
gcctttctccgcatcgacgaggccgcgcgcgactga
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