Silicimonas algicola: EF888_07105
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Entry
EF888_07105 CDS
T05779
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
salo
Silicimonas algicola
Pathway
salo00550
Peptidoglycan biosynthesis
salo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EF888_07105
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
salo01002
]
EF888_07105
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
salo01011
]
EF888_07105
Enzymes [BR:
salo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
EF888_07105
Peptidases and inhibitors [BR:
salo01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
EF888_07105
Peptidoglycan biosynthesis and degradation proteins [BR:
salo01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
EF888_07105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
AZQ66928
UniProt:
A0A316G5E2
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All DBs
Position
complement(1419127..1420305)
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AA seq
392 aa
AA seq
DB search
MFRPLATFAVFVLVSACATSAPVPARAEYETQATASYMYDITTDTVLVEKNADEPLPPAS
MSKLMTLYMLFEALRDGRVTMDTTFSVSTRAREMGGSTMFLDETDRPRVEDLIKGIIVQS
GNDACVVVAEGLAGTEDAFARQMNARAPEIGLTNSTFTNASGWPDPNHRMSVRDLGRVAT
LLITEFPEYYGFFALEEYDFDGRSPSNRFNRNPILGLGLGADGLKTGHTEEAGYGLVGSA
KQGDRRIVFVFSGLSSMAERRQEAEAMINWGFRQFVPKNLAKSGAVVTEVPVWMGNFERV
NAIAREDITLLVPAIGQDSLQTRVEFRSPIEAPIEEGGQVAELVITAPDMPEKRIPLVSD
RAVTRGGFLPRVRASSYVLFDKAKGQVQSLME
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgttccgccccctggccaccttcgccgtattcgtcctcgtctcggcttgtgcgacgagc
gcgcccgtccctgcgcgcgccgagtacgagacgcaggcgacggcctcgtacatgtacgac
atcaccaccgacacggtcctcgtcgagaagaacgccgacgagccgctgccgcccgcctcg
atgtcgaagctgatgacgctctacatgctgttcgaggcgctccgcgacggacgcgtcacg
atggacacgacgttcagcgtttcgacacgcgcccgcgagatgggcggctcgacgatgttt
ctggacgaaaccgaccgtccgcgcgtcgaagacctgatcaagggcatcatcgtgcagtcc
ggcaacgacgcctgcgtggtcgttgccgagggcctggctggcaccgaagacgccttcgcc
cgccagatgaatgcgcgcgcgcccgagatcggtctgacgaactcgaccttcaccaacgcg
tccggatggcccgatccgaaccaccgcatgtcggtgcgtgatctcggccgcgtggccact
ctgctgatcaccgagtttcccgagtactatgggttcttcgccctcgaggagtacgacttc
gacggacgctcgccctcgaaccgcttcaaccggaacccgatcctggggcttggcctcggc
gcggacgggctcaagacgggccacaccgaggaagccggctatggcctcgtgggctcggcc
aagcagggtgaccgccggatcgtcttcgtcttctcgggcctgagcagcatggccgaacgc
cggcaggaggccgaggcgatgatcaactggggcttccgtcagttcgtgccgaagaacctc
gccaagtcgggggccgtcgtgaccgaagtgccggtgtggatgggcaacttcgagcgcgtc
aacgccatcgcgcgcgaggacatcacgcttctggttccggcgatcgggcaggacagcctt
cagacccgcgtcgagttccgcagccctatcgaagcgccgatcgaggagggcggacaggtc
gccgaactggtcatcaccgcgcccgacatgcccgagaagagaatccccctcgtatcggac
cgcgccgtcacgcgcggaggcttcctgcctcgcgtgcgcgcctcgtcctacgtgctgttt
gacaaggccaagggtcaggtgcaaagcctgatggaatga
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