Silicimonas algicola: EF888_07940
Help
Entry
EF888_07940 CDS
T05779
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
salo
Silicimonas algicola
Pathway
salo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EF888_07940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
salo02000
]
EF888_07940
Transporters [BR:
salo02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
EF888_07940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
Phosphonate-bd
Stonin2_N
Ral
Motif
Other DBs
NCBI-ProteinID:
AZQ67071
UniProt:
A0A316G510
LinkDB
All DBs
Position
complement(1582619..1583773)
Genome browser
AA seq
384 aa
AA seq
DB search
MSARFLLSAAVSAILVAQPVLAQVSELGDGEGQVDIVAWPGYIERGETDAAFDWVTKFEE
ASGCKVNVKTANTSDEMVALMNEGGFDLVTASGDASLRLVAGKRVQPVNTALIPSWSTID
ERLQNAPWHTVDGVHYGVPYQWGPNVLMYSTEAFGDTPPDSWSVVFEETTLPDGQSNSGR
VQAYDGPIHVADAANYLMHHKPELGIANPYELNEDQYKAALDLLRQQRTLVSRYWHDAFI
QMDDFKNEGVVASGSWPFQVNILKSEGAPIASVIPVEGATGWADTTMMHVDAAHPNCAYM
WMEHTLSSNLMSDLSAWFGSVPAVPAACSDGSGMQTAEGCSANGLDDFDRIRFWTTPVSA
CESQGECVPYYRWVSDYIGVIGGR
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcacgcttccttttgtcggccgcggtctcggcgatcctcgtggcccagccggtc
ctcgcccaggtgtccgagcttggcgatggcgagggccaggtcgatatcgtggcatggccc
ggctacatcgaacgcggcgagaccgacgccgccttcgactgggtgaccaagttcgaagag
gcctcgggctgcaaggtcaacgtcaagacggccaacacctcggacgagatggtggccctg
atgaacgaaggcggcttcgacctcgtcaccgcctcgggcgacgcctctctccgtcttgtc
gccggcaagcgcgtccagccggtgaacacggcgctcatcccgtcatggtccaccatcgac
gagcgcctgcagaacgcgccctggcacaccgtcgacggcgtccattacggcgtcccctac
cagtggggtccgaacgtgctgatgtattcgaccgaagccttcggcgacacgccgcccgat
agctggagcgtcgtcttcgaggagacgacccttccggacggccagtccaattcgggacgg
gtgcaggcctatgacggcccgatccacgtcgccgacgccgccaactacctcatgcaccac
aagcccgaactcgggatcgccaacccatacgaactgaacgaggaccagtacaaggcagcg
ctcgaccttctgcgccagcagcgcacgctggtcagccgctactggcacgacgccttcatc
cagatggacgatttcaagaacgagggcgtcgtcgcctcggggtcatggccgttccaggtc
aacatcctgaaaagcgaaggcgcgcccatcgccagcgtcatcccggtggagggcgcgaca
ggctgggccgacacgacgatgatgcacgtcgacgccgcccatcccaattgcgcctacatg
tggatggagcacacgctgtcgtcgaacctgatgtccgatctttccgcctggttcgggtcg
gtcccggcggtgccagcggcctgctcggacggctcggggatgcagaccgccgagggctgc
tcggccaacggtctcgacgacttcgaccggatccggttctggaccacgcccgtcagcgcc
tgcgaaagccagggcgagtgcgtgccctactatcgatgggtcagcgactatatcggcgtc
atcggcggccgctga
DBGET
integrated database retrieval system
