Silicimonas algicola: EF888_11940
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Entry
EF888_11940 CDS
T05779
Name
(GenBank) glycoside hydrolase family 43 protein
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
salo
Silicimonas algicola
Pathway
salo00520
Amino sugar and nucleotide sugar metabolism
salo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
EF888_11940
Enzymes [BR:
salo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
EF888_11940
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GFIT
Motif
Pfam:
Glyco_hydro_43
GH43_C2
Motif
Other DBs
NCBI-ProteinID:
AZQ67783
UniProt:
A0A316GB14
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Position
complement(2401072..2402667)
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AA seq
531 aa
AA seq
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MIRNPILPGFHADPSICRVGDTFYIATSTFEWYPGVRIHRSTDLANWEFAAAPLDRAALL
DMRGNPDSGGIWAPCLSHADGLFWLVYTDVKRLDGAFKDAHNYITCAERIEGPWRDPWYV
NSSGFDPSLFHDEDGRKWFVNMRWNHRGKGTGGNPKHASFDGILLQEWSPSQGLTGECSS
IYDGTDRGLTEAPHLFRRNGWYYLTTAEGGTGYGHAVTMARSRDIRGPYETHPDKFLLSA
ADAPDHPIQRTGHGQYVEGPDGTLWHTFLMGRPIAGPDGQGRFCPLGRETGIEKVVWGDD
DWLYLEGGGLLVREEVPHDADSPLPQPSAYDFAEGLHHDFQWLRHPHPDRLFRTGLDGLT
LIGRESIGSWFEQSLVARRQQHLAYRAETTLDVMPGDYQHAAGLTTYYNRHKFHALLVTH
EPGMGRVLTIQSCPGNWPDCALEHPLDAPVPLAEGPVDLAVEVDHATQQFYWRQGGDWQA
IGPVLNAAVISDEGGRGEHASFTGAFVGLVAYDTSGQAREARFDRFSYVPA
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcaacccgatcctccccggcttccacgcggatccttcgatctgccgcgtcggc
gataccttctacatcgccacctcgaccttcgagtggtatcccggcgtccgcatccaccgc
tcgaccgacctggccaactgggagtttgcggccgccccactggaccgtgcggcgcttctc
gacatgcgcggcaatccggactcggggggcatctgggcgccttgcctgtcccatgccgac
gggctgttctggctggtctacaccgacgtcaagcggcttgatggggcgttcaaggacgcg
cacaactatatcacctgcgccgaacggatcgaaggaccgtggcgcgacccgtggtatgtc
aattcctcgggcttcgacccgtcgctgttccatgacgaggacgggcgcaagtggttcgtc
aacatgcgctggaaccaccgcggcaagggcacgggcgggaacccgaagcacgccagcttc
gacggcatcctcctgcaggaatggtcgccgagccaggggcttacgggcgaatgttctagt
atatatgacggcaccgaccgcggtttgaccgaagcgccacacctgttcaggcgaaacgga
tggtactatttgacgacggccgagggcggtacgggctatggccacgcggtgacgatggca
cgctcgcgcgacatccgcggaccctacgagacgcatccggacaagttcctcctctcagcc
gccgacgctccggaccacccgatccagcggaccggacacgggcagtacgtcgagggtccg
gacggtacgctctggcacaccttcctgatggggcgtccgatcgcgggaccggacgggcag
gggcggttctgccccctcggccgcgagacgggcatcgagaaggtggtctggggcgacgac
gactggctttatctcgaaggcggcggcctccttgtccgcgaggaggtgccacatgacgcc
gacagcccgctgccgcagccatcggcctatgacttcgccgagggtctccatcacgacttc
cagtggctgcgccatccgcatcccgacaggctgttccggacggggctggacggcctgacc
ctgatcgggcgcgagagcatcggaagctggttcgaacaatccctcgtcgcccgccggcag
cagcacctggcctatcgggccgagacgacgctcgacgtgatgcccggcgactaccaacac
gccgccgggctgacgacatattacaaccggcacaagttccacgctcttctcgtcacccac
gagccggggatgggccgcgtcctgacgattcagagctgccccggcaactggcccgactgc
gcgctcgagcatccgctcgacgctcccgtccccctggccgagggcccggtggacctggcc
gtcgaggtcgatcacgcgacccagcagttctactggcggcaaggcggcgactggcaggcc
ataggccccgtcctgaacgccgccgtcatctcggacgagggcggacggggcgagcacgcg
tccttcactggggccttcgttggccttgtcgcctacgacacctcgggtcaggcgcgcgag
gcgaggttcgaccgattctcgtatgtgcccgcatga
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