Silicimonas algicola: EF888_12285
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Entry
EF888_12285 CDS
T05779
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
salo
Silicimonas algicola
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salo03000
]
EF888_12285
Transcription factors [BR:
salo03000
]
Prokaryotic type
Helix-turn-helix
LacI family
EF888_12285
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
HTH_3
SH3_18
Xre-like-HTH
HTH_24
HTH_Crp_2
HTH_IclR
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AZQ67846
UniProt:
A0A316GAT5
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Position
2480962..2482011
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AA seq
349 aa
AA seq
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MNLKELSAILGLSPTTVSRALNGYPEVSEATRRRVLAEAKRQNYHPDTRAKRLATGRAMT
IGHILPVSKEHEMVNPIFADFLAGAGEVYAGAGYDLSLAVVRDEDEAEAYRDLARRGTVD
GVVLHGPKLDDPRIPLLRELGLPFVVHGRSTDAEGDYNWVDVDNRRAFARAARHLLDLGH
RRIALINGLADMDFALRRLFGFSDALAERSLPVEDRWTAHGEMTETYGYETVRGMLEAHD
PPTAFLVASIIPALGARRAIHDMGLRIGDEVSVVIHDDALSYFRNEGTPPVYTAVRSSVR
KAGRLCADLLLQSIAEPNRAPDHILLEAELSLGQSSGPAPRLFRQRKSR
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcaaggaactctccgccatcctcggcctctcgccgacgacggtcagccgggcg
ctgaacggctatcccgaggtcagcgaggccacgcggaggcgcgtgctggcggaggccaag
cggcagaactaccaccccgacacgcgcgcgaagaggctggcgaccggccgggccatgacc
atcgggcacatcctgcctgtctcgaaggagcacgagatggtcaacccgatcttcgccgac
ttcctggccggcgcgggcgaggtctatgccggagcggggtacgacctgtcgctcgcggtg
gtgcgggacgaggacgaggcggaggcctaccgcgacctcgcccggcgcggcacggtggac
ggcgtggtgctgcacgggccgaagctggacgacccgcgcatcccgctgctgcgcgagttg
gggttgcccttcgtggtccatggccggtcgacggacgccgagggcgactacaactgggtc
gacgtcgacaaccggcgcgccttcgcgcgggcggcgcggcatcttctcgacctcgggcac
cgccggatcgcgctgatcaacgggttggccgacatggacttcgccctgcgtcgcctcttc
ggtttctccgatgcgctcgccgaacgcagccttccggtggaggaccgctggaccgcgcat
ggcgagatgaccgagacatacggctatgagacggtgcgcggaatgctcgaggctcacgat
ccgccgaccgcgttcctcgtcgcctcgatcatccctgcactcggtgcgcggcgcgcgatc
cacgacatgggccttcgcatcggggacgaggtgtcggtggtgatccacgacgacgcgctg
tcctatttccgcaacgaggggacgccgcccgtctacaccgccgtgcggtcgtcggtccgc
aaggcgggacggctctgcgccgaccttcttctgcaaagcatagccgaaccgaaccgcgct
ccggatcatatccttcttgaagccgagctttccctggggcaatcgtcaggcccggctcct
cgcctgttccgccagagaaagtcccgctga
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