KEGG   Silicimonas algicola: EF888_12695
Entry
EF888_12695       CDS       T05779                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
salo  Silicimonas algicola
Pathway
salo02020  Two-component system
Brite
KEGG Orthology (KO) [BR:salo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    EF888_12695
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:salo02022]
    EF888_12695
Two-component system [BR:salo02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   EF888_12695
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 cREC_REC FleQ Mg_chelatase AAA_2 AAA_16 MCM VpsR
Other DBs
NCBI-ProteinID: AZQ67919
UniProt: A0A316GRK7
LinkDB
Position
complement(2563957..2565381)
AA seq 474 aa
MGDILIVDDERDIRELISDILKDEGFTTRLAGTSDDAMAELNKEPPALMILDIWLKDSRM
DGIDILKTVKRDNPDVPIIIISGHGNIEIAVAAIKQGAYDFIEKPFNIDQLMVVITRAME
TSRLRRENSELRRKDVTTTDMIGMSPAFRTLKSQLDKVTKSNGRVMLTGPSGAGKEIAAR
YIHTHSERSDGPFITVNSASIEPERMEEVLFGRESSGRGIEPGLLEQAHGGVIYFDEVAD
MPLGTQSKILRVLTEQQFQRVGGGDKVRVDLRVISSTTRNLEAEVESGTFRQELFHRLNV
VPIDVPALAERREDIPELATHFIHSFNKAQGLPLRKLSEEAVTMLQTMGWPGNVRQLKNV
IERVLILGGDRGDIQASEIPSETPPESSEEGRVVLSGSLATLPLREARELFEREYLLTQI
NRFGGNISRTAGFVGMERSALHRKLKSLNVVTSSRSGARIASVLDEEADLEEDA
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgggcgacattctgatcgtagacgacgaacgcgacatccgcgaactgatctcggacatc
ctcaaggacgaggggttcaccactcgtctggccgggacatcggacgacgcgatggccgaa
ctgaacaaggagccgccggcgctgatgatcctcgacatctggctgaaggacagccggatg
gacggcatcgacatcctcaagacggtgaagcgcgacaacccggatgtgccgatcatcatc
atttcgggccacggcaacatcgagatcgcggtcgcagcgatcaagcagggcgcctacgac
ttcatcgagaagcccttcaacatcgaccagctcatggtggtcatcacccgcgcgatggag
acgtcgcggcttcggcgcgaaaactccgaactgcgacggaaggacgtgacgacgacggac
atgatcggcatgtcgccggccttccgcacgctcaaatcgcagctcgacaaggtgacgaag
tcgaacggccgcgtgatgctgaccggcccgtcgggcgcggggaaggaaattgccgcgcgc
tacatccacacccactccgagaggtcagacggccccttcatcaccgtcaactcggcgtcg
atcgagcccgagcggatggaggaggtcctcttcggccgtgaaagctcgggccgcgggatc
gagccgggtctgctggagcaggcgcatggcggggtgatctacttcgacgaagtggccgac
atgccgcttggaacgcagtccaagatcctgcgcgtcctgaccgaacagcagtttcagcgc
gtcggcggcggcgacaaggtgcgggtcgacctgcgcgtgatttcgtccaccacgcgcaac
ctcgaggccgaggtcgagagcggcaccttccgccaggagctgttccatcgactgaacgtg
gtgccgatcgacgtgccggcgctggccgaacggcgcgaggacatccccgaactcgccacg
catttcatccacagcttcaacaaggcgcagggtcttccgcttcggaaactgtcggaagag
gccgtgacgatgcttcagaccatgggctggcccggcaatgtgagacagctcaagaacgtc
atcgagcgcgtcctgatccttggcggcgacaggggcgacattcaggcctccgagatcccg
tccgagacgccgcccgagtcttccgaggaaggccgtgtcgtgctgtcgggaagcctcgcc
acgctgcccctgcgcgaggcgcgggagttgttcgagcgcgaatacctgctcacgcagatc
aaccgcttcggcggcaacatcagccgcacggcgggcttcgtcggcatggagcggtctgcg
ctgcaccgcaagctcaagtcgctgaacgtcgtgacctcgtcccgctcgggcgcccgcatc
gcaagcgtgctggacgaggaggcggacctggaagaggacgcttga

DBGET integrated database retrieval system