Silicimonas algicola: EF888_14165
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Entry
EF888_14165 CDS
T05779
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
salo
Silicimonas algicola
Pathway
salo00630
Glyoxylate and dicarboxylate metabolism
salo00680
Methane metabolism
salo01100
Metabolic pathways
salo01120
Microbial metabolism in diverse environments
salo01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
EF888_14165
09102 Energy metabolism
00680 Methane metabolism
EF888_14165
Enzymes [BR:
salo01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
EF888_14165
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
Fer4_7
Fer4_9
Fer2
Fer4_8
Fer4_21
Fer4
Fer4_10
Fer4_17
Fer4_16
Fer4_2
Fer4_4
Fer4_6
Fer4_22
TPP_enzyme_M
Fer4_18
Fer4_13
CDC48_N
Motif
Other DBs
NCBI-ProteinID:
AZQ68178
UniProt:
A0A316GIS0
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Position
complement(2879032..2881821)
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AA seq
929 aa
AA seq
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MPDGTQIQQVTFTLDGREVTVPEGTTIWEAAFGQGLRIPHLCHKPAPGYRPDGNCRACMV
EVEGERVLVASCIRPAADGMVVKSATERAEKARKLVTELLVADQPKRDVAHDKSSHFWDM
ADLNGVTESRFPPMEEVRVPLLDASHVAMRVNLDACIQCNLCVRACRDVQVNDVIGMAYR
GHDSKIVFDQDDPMGASTCVACGECVQACPTGALMPATVVDDAQVGDSADFDSEVDSVCP
YCGVGCQISFKVKDGKIKYVEGIDGPANENRLCVKGRFGFDYIQHPHRLKKPLIRREDAP
EKGLNVDPANILTHFREATWDEALDAAANGLAKLREDTGRRVAGFGSAKCSNEEAYLFQK
LIRQGFGHNNVDHCTRLCHASSVAALMENVGSAAVTATFNEIENADVAIAIGCNPTENHP
VAATYFKQFAKRGGKLIVMDPRANGLKRYASHMLQFKPGADVSMLNAIMHVIVEEGLYDE
QYIQGYTENWEAMKEHLKGFSPEKMSAICGIDAEVLRDVARTFAGAKAGMIFWGMGISQH
IHGTDNSRCLISLALMTGQVGRPGTGLHPLRGQNNVQGASDAGLIPMFLPDYQPVTDDGV
RSAFTDVWKSSDFSSEKGLTVVEIMDAIHAGDIRGMYILGENPAMSDPDASHARDALAKL
EHLVVQDIFLTETANYADVILPSSAWYEKTGTVTNTNRQVQMGRPVMPPPGEAKEDWWIE
VELAKRLGLDWDYTHPRQVFAEMKINMKSLDNITWERLERSAVTYPSLSPEDPGQAIVFG
DGFPRADGRAKFTPASVIQPDELPDAEYPMVLITGRQLEHWHTGSMTRRSKVLDAMEPEA
NCSMHPRTLRALGVEAGDYVQLTTRRGTVSVMARSDRAIGEGQVFLPFAYVEAAANILTN
PALDPFGKIPEFKFSAVRVEKAKDAVAAE
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgccggatggaacacaaatccaacaggtcaccttcacgctcgacgggcgcgaggtcacc
gttcccgagggcactaccatatgggaggccgccttcgggcagggtcttcggatcccccac
ctctgccacaagccggcaccgggctatcgccccgacggcaactgccgcgcctgcatggtc
gaggtcgagggcgagcgtgtcctcgtcgcctcgtgcatccggcccgccgccgacggcatg
gtggtgaagtccgccacggaacgcgctgagaaggcgcgcaaactcgtcaccgagcttctg
gtcgccgaccagcccaagcgcgacgtcgcgcatgacaagtcctcgcacttctgggacatg
gcggacctgaacggtgtcaccgaaagccgcttccccccgatggaagaggtccgcgtcccg
cttctcgacgccagccacgtcgccatgcgcgtcaacctcgacgcctgcatccagtgcaat
ctctgcgtccgcgcctgtcgcgacgtgcaggtcaacgacgtgatcggcatggcctatcgc
gggcacgattcgaagatcgtcttcgaccaggacgaccccatgggcgcctcgacctgcgtc
gcctgcggtgaatgcgtccaggcctgtccgacgggcgcactgatgcccgcgaccgtggtg
gacgatgcccaggttggcgacagtgccgacttcgacagcgaggtggattccgtctgcccc
tattgtggcgtcggctgccagatctctttcaaggtcaaggacggcaagatcaagtacgtc
gagggtatcgatggcccggcgaacgagaaccggctgtgcgtcaagggccgcttcggcttc
gactatatccagcacccgcatcgcctgaagaaacccctgatccggcgcgaggacgcgccc
gagaaggggctgaacgtcgatccggcgaacatcctgacccacttccgcgaggcgacctgg
gacgaggcgctggacgccgcggcgaacggccttgcgaagctgcgtgaggataccggacgc
cgggtggcgggcttcggttcggcaaagtgttcgaacgaagaggcctatctcttccagaag
ctgatccggcaggggttcggccacaacaacgtcgaccactgcacccgtctctgccacgcc
tcgtctgtggcggcattgatggagaacgtcggcagcgcagcggtgacggcgaccttcaac
gagatcgagaatgcggacgtggccatcgccatcggctgcaacccgaccgagaaccacccg
gtcgcggcgacctacttcaagcagttcgccaagcgcggcggcaagctgatcgtgatggat
ccgcgcgccaacgggctgaagcgctatgcctcgcacatgctccagttcaagccgggcgcc
gatgtctcgatgctgaacgcgataatgcacgtcatcgtcgaggaagggctctacgacgag
cagtacatccagggctacaccgagaactgggaggcgatgaaggagcatctgaagggcttc
tcgcccgagaagatgtccgcgatctgcggcatcgacgccgaagtccttcgcgacgtggcc
cgcaccttcgcgggcgccaaggcggggatgatcttctggggcatgggcatctcgcagcac
atccacggcaccgacaactcgcgctgcctcatcagcctcgcgctgatgacggggcaggtc
gggcgtccgggcacgggcctccatccgctccgtggccagaacaacgtccagggcgcgtcg
gatgcgggcctcattccgatgttcctgccggactatcagccggtgacggacgacggcgtg
cgctcggccttcaccgatgtctggaagtccagcgacttctcgtccgagaagggtctgacc
gtggtcgagatcatggacgcgatccatgccggcgacattcggggcatgtatatcctgggc
gagaacccggcgatgtccgaccccgacgcaagccacgcccgcgatgctctggcgaagctc
gagcacctcgtcgtccaggacatcttcctgaccgagacggcgaattatgcagacgtgatc
ctgccgtcctcggcctggtacgagaagaccgggaccgtcaccaacacaaaccggcaggtc
cagatgggccgtccggtgatgccgccgccgggcgaggcgaaggaagactggtggatcgag
gtcgaactggccaagcggctgggcctcgactgggactatacgcatccgcgccaggtcttt
gccgagatgaagatcaacatgaagtcgctcgacaacatcacctgggagcgtctcgaaaga
tcggcggtgacctatccgtcgctttcgcccgaggacccgggtcaggcgatcgtcttcggc
gacggcttccctcgtgccgacggtcgggcgaaattcaccccggccagcgtcatccagccg
gacgagctgccggacgccgaatacccgatggtcctcatcaccggccgccagctcgagcac
tggcacacgggctcgatgacgcggcgctcgaaggtgctggatgcgatggagccggaggcc
aattgttcgatgcatccgcggaccttgcgtgcgcttggcgtcgaggcgggcgactacgtt
caactcaccacgcggcgcgggacggtttcggtcatggcgaggtcggaccgcgcaatcggc
gagggtcaggtcttcctgcccttcgcctatgtcgaggcggctgcgaacattctgacgaac
cccgctctcgatcccttcggcaagatccccgagttcaagttctcggcggttcgggtcgag
aaggcgaaagacgccgtcgcggccgagtaa
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