Silicimonas algicola: EF888_15795
Help
Entry
EF888_15795 CDS
T05779
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
salo
Silicimonas algicola
Pathway
salo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EF888_15795
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
salo02000
]
EF888_15795
Transporters [BR:
salo02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
EF888_15795
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
SMC_N
oligo_HPY
AAA_29
AAA_22
AAA_21
AAA_16
DUF87
NACHT
ABC_ATPase
nSTAND3
Sigma54_activat
AAA_25
RsgA_GTPase
nSTAND1
AAA_18
ATP-synt_ab
Mg_chelatase
NB-ARC
AAA_5
RNA_helicase
DUF3987
AAA_19
AAA_23
MMR_HSR1
AAA_33
AAA_15
DO-GTPase2
NIR_SIR
DUF815
Motif
Other DBs
NCBI-ProteinID:
AZQ68465
LinkDB
All DBs
Position
complement(3225211..3226836)
Genome browser
AA seq
541 aa
AA seq
DB search
MAGHLLEVRGLSVDFHTAQGAVHAVRNVSWHLDRGETLAILGESGSGKSVSASAIMNLID
CPPGDIDSGEVLFEGRDVLKMSDEQRRQLNGKRIAMIFQDPLSHLNPVYTVGFQIMETMT
THGVSKADARARTLELMERVGIPDFGTKIDAYPHQFSGGQRQRLMIAMALALKPDILIAD
EPTTALDVTVQAQILALLEELQKETGMGLLLITHDLGVVAEVADRVVVMNSGEIVETGSA
AEVYRNPHHPYTKKLISAVPGTGGMAASLGTGIRPLLDVQGISKRFGDFLALDEATFTVL
PGETVAIVGESGSGKSTLAKALLRLIEPTSGAAFYDSRDLVTMPPKELFELRRDIQMVFQ
DPTQSLNPRMSVYQIVSEAFAIHRDILPKDRWQGRVRELLEQVGLDASHMRRYPHQFSGG
QRQRIAIARALALEPKLIICDEAVSALDVSIQAQVIRLLRGLQERLHLSYLFIAHDLPLV
RDFAHRVVVMQAGRIVEQGPVRQIFEAPQADYTRSLIAASLHPDPEVQAERRAVRELRRE
A
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggccggccacctgctcgaggttcgcggcctttcggtcgacttccataccgcgcagggc
gcggtccatgccgtgcggaatgtctcgtggcacctcgaccgaggcgagacgctggcgatc
ctcggcgaaagcggatcgggcaagtcggtgtcggccagtgccatcatgaacctgatcgat
tgcccgccgggcgatatcgactcgggcgaggtcctgttcgagggccgggacgtcctgaaa
atgtccgacgagcagcggcgtcagctcaacggcaagcggatcgcgatgatcttccaggac
ccgctcagccacctgaacccggtctataccgtcggcttccagatcatggagacgatgacg
acacacggcgtgtcgaaggccgatgcgcgggcgcggacgctcgagctgatggagagggtc
ggtatccccgacttcgggaccaagatcgacgcctatccgcaccagttctcgggcggtcag
cggcagcggctgatgatcgcgatggcgcttgcgctgaagcccgacatcctgattgccgac
gaacccacgaccgcgctcgacgtgacggtgcaggcgcagatcctggcgctgctggaggag
cttcagaaagagaccggaatgggtctccttctcatcacccacgaccttggcgtcgtggcc
gaggtggccgaccgcgtcgtcgtgatgaactcgggcgagatcgtcgagaccggcagcgcc
gccgaggtctaccgcaacccgcaccacccctatacgaagaaactgatctcggccgttccg
gggacgggcggcatggcggcgtctctgggaaccggcatcaggccccttctcgacgtgcag
ggcatctcgaagcgcttcggggatttcctcgcgctcgacgaggcgacgttcaccgtcctt
ccgggcgagacggtcgccatcgtgggagagtccggctcgggcaagtcgacgctggcgaag
gcgcttctgcgcctgatcgagcccacgtcgggcgcggccttctacgacagccgagacctg
gtgacgatgccgccgaaggagctgttcgagcttcgccgggacatccagatggtgttccag
gaccccacgcagtcgctcaatccgcgcatgtcggtctatcagatcgtgtccgaggccttc
gcgatccatcgagatatcctgccgaaggatcgctggcagggcagggtgcgcgagcttctg
gaacaggtcgggctcgacgccagccatatgcggcgttacccgcaccagttctcgggcggc
cagcggcagcgtatcgccatcgcacgggcgctggcgttggagccgaagctgatcatctgc
gacgaggcggtttcggcgctggacgtgtcgatccaggcgcaggttatccgcttgttgcgc
gggcttcaggagcggctgcacctcagctatctgttcatcgcacacgacctgccccttgtg
cgcgacttcgcgcaccgggtcgtcgttatgcaggccgggcgcatcgtcgaacaggggccg
gtcaggcagatcttcgaagcgccgcaggccgactatacgcggagcctcatcgccgccagc
ctgcacccggatcccgaggttcaggccgagcggcgtgccgtgcgcgagcttcggagggag
gcgtga
DBGET
integrated database retrieval system
