Silicimonas algicola: EF888_15920
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Entry
EF888_15920 CDS
T05779
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
salo
Silicimonas algicola
Pathway
salo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EF888_15920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
salo02000
]
EF888_15920
Transporters [BR:
salo02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
EF888_15920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA
ABC_ATPase
AAA_22
Rad17
AAA_16
ORC-CDC6-like
OB_MalK
ATP-synt_ab
nSTAND3
AAA_25
RsgA_GTPase
nSTAND1
AAA_28
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
AZQ68487
UniProt:
A0A316GLT1
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All DBs
Position
complement(3254612..3255673)
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AA seq
353 aa
AA seq
DB search
MSFLEIEHLEKSFGSVRVVKDFNLPIEKGEFVSLLGPSGCGKTTVLRMVAGFETPSTGSI
RIDGRDVVSLRPNQRNIGMVFQSYALFPNLTVAQNVAFGLKVKGVKVADRTARVAEMLRL
IGLEGYDDRYPFQLSGGQQQRVALARALAVQPQVLLLDEPLSALDAKIRVSLREEIRDIQ
RRLAITTIFVTHDQEEALSISDRVVVMNGGVAEQVGQPFEIYNRPSTRFVAEFVGTLNLI
EARVLDRDSGRIGIGSREASLGRPLTSDRLTLGIRPEALTLGRAADRDMVLEGRIDDVHF
LGSVIRIQATVAGERVMLDTFNRPGTPPPAPGQAAEFSVHPEDLLVLEGERSP
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttctcgaaatcgagcacctcgaaaagtctttcggctccgtaagggtcgtgaag
gacttcaaccttccgatcgagaagggcgagttcgtctcgcttctggggccctcgggctgc
ggcaagacaacggtgctgcggatggtcgccgggtttgagacgccctcgaccggctcgatc
cggatcgacgggcgcgacgtggtgtcgcttcgtccgaaccagcgcaacatcggcatggtg
ttccagtcctacgcgctgtttccgaacctgacggtggcgcagaacgtggccttcgggctg
aaggtcaagggcgtcaaggtcgccgaccgaaccgctcgcgtggccgagatgctgaggctc
atcggacttgagggctatgacgaccgctatcccttccagctctccggcggacagcagcag
cgggtcgcactggcgcgtgcgctggcggtccagccgcaggtccttctgctcgacgaaccg
ctgtcggcgctcgacgccaagatccgcgtgagccttcgtgaagaaattcgcgacattcag
cgacgcctcgccatcacgacgatcttcgtcacccacgatcaggaagaggcgctgtcgatt
tcggaccgcgtcgtggtgatgaacggtggcgtggccgaacaggtgggtcagccgttcgag
atctacaaccgaccctcgacacggttcgtggccgagttcgtcggaacgctcaacctgatc
gaggccagggtgcttgaccgcgacagcggccgcatcgggatcggctcgcgcgaggcaagt
ctcggacggccgcttacgtccgaccggctgacgctggggataaggcccgaagcgctgacg
ctcggccgcgcggccgaccgcgacatggtgctggaaggccggatcgacgacgtgcatttc
ctcggctcggtgatcaggattcaggccaccgtcgcaggcgaacgggtgatgctcgacacc
ttcaaccgacccggcacaccgccgcccgcgccggggcaggcggcggagttctcggtgcat
cccgaagaccttctcgtgctcgagggcgagagatcgccgtga
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integrated database retrieval system
