Silicimonas algicola: EF888_16170
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Entry
EF888_16170 CDS
T05779
Symbol
cydB
Name
(GenBank) cytochrome d ubiquinol oxidase subunit II
KO
K00426
cytochrome bd ubiquinol oxidase subunit II [EC:
7.1.1.7
]
Organism
salo
Silicimonas algicola
Pathway
salo00190
Oxidative phosphorylation
salo01100
Metabolic pathways
salo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
EF888_16170 (cydB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EF888_16170 (cydB)
Enzymes [BR:
salo01000
]
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.7 quinol oxidase (electrogenic, proton-motive force generating)
EF888_16170 (cydB)
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GFIT
Motif
Pfam:
Cyt_bd_oxida_II
DUF4538
Motif
Other DBs
NCBI-ProteinID:
AZQ69748
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All DBs
Position
complement(3301821..3302828)
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AA seq
335 aa
AA seq
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MFGYELSFLWAGLIAFAVLTYVVLDGFDLGIGILFPFYPNEKHRDVMMNSVAPVWDGNET
WLVLGGGGLMAVFPLAYAVVMPALYMPIILMLLALVFRGVSFEFRWKTTRWRGVWDIAFF
GGSLIAALSQGIALGALVQGIEVENRAYAGGWWDWLTPFSLMTGVAVATGYALLGATWII
MKTEGTVADRMRRHALQLGAATLVFIGIVSLWTPFQDRVYFERWFTGATWYWSVIVPVLM
AAAAFVLWRGIAYRHDVTPFLASLSIFVLSFVGIGVSFYPMIVPPSLTIVEAAAPESSLR
FALVGALILIPIILIYTAYSYWVFRGKIDPDEGYH
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgttcggatacgagctttccttcctctgggccgggctcatcgccttcgccgtgctgacc
tatgtcgtgctcgacggcttcgacctggggatcggcatcctgtttccgttctatcccaac
gagaagcaccgcgacgtgatgatgaattcggtcgccccggtctgggacggcaacgagacc
tggctggtcctgggcgggggcgggctgatggcggtctttcccctggcctatgccgtggtg
atgccggcgctctacatgccgatcatcctgatgctgctcgcgcttgtcttccggggcgtg
tccttcgagttccgctggaagacgacgcggtggcgcggggtgtgggacatcgctttcttc
ggcggctcgctgattgcggcgctgtctcagggcatcgcgcttggcgcgctggtgcagggc
atcgaggtcgagaaccgcgcctatgcgggcggctggtgggactggctgacgccgttctcg
ctgatgacgggtgtcgcggtggcgacgggatacgcgcttctgggcgcgacgtggatcatc
atgaagaccgagggcacggtcgccgaccggatgcggcggcacgcgcttcagcttggcgca
gcgacgctggtcttcatcgggatcgtcagcctctggacgccgttccaggaccgcgtctac
ttcgagcgctggttcaccggcgcgacgtggtactggtcggtgatcgtgccggtcctgatg
gcggcggcggccttcgtcctgtggcgcggcatcgcctatcgccacgacgtgacgccgttc
ctcgcgtcgctgtcgatcttcgtgctgtccttcgtcggcatcggggtcagcttctatccg
atgatcgtgccaccctcccttaccatcgtcgaggcggcggcgcccgagtcctcgctgcgc
ttcgcgctggtgggcgcgctgatcctgatcccgatcatcctgatctataccgcctattcc
tattgggtgttccgcggcaagatcgacccggacgagggctatcactga
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