Silicimonas algicola: EF888_17805
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Entry
EF888_17805 CDS
T05779
Name
(GenBank) PDZ domain-containing protein
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
salo
Silicimonas algicola
Pathway
salo01503
Cationic antimicrobial peptide (CAMP) resistance
salo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EF888_17805
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
EF888_17805
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
salo01002
]
EF888_17805
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
salo03110
]
EF888_17805
Enzymes [BR:
salo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
EF888_17805
Peptidases and inhibitors [BR:
salo01002
]
Serine peptidases
Family S1: chymotrypsin family
EF888_17805
Chaperones and folding catalysts [BR:
salo03110
]
Other chaperones and cochaperones
DegP / HtrA
EF888_17805
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ_2
PDZ_6
PDZ
PDZ_Tricorn
PDZ_1
SurA_N_3
DUF2390
DUF4350
Motif
Other DBs
NCBI-ProteinID:
AZQ68822
UniProt:
A0A316G7D1
LinkDB
All DBs
Position
complement(3619430..3620608)
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AA seq
392 aa
AA seq
DB search
MKMLNPNMCSAAVVALLSLPFASGSVLAQQAGQTDQSATPSPNAQQPFRSESGGVQQDDL
VATVGDAEIRGSDLRTIIGMLPPQLQSQPPQMLVPLALEQLILRELILEEARSQNLADDP
EVVALVENSAQTVEEDAMVQVWLDRETRGAVTEEAVQRTYETIQPRGGAAVPPLEQLRPQ
IEQHLRQQAAQEIRNRLRQGAEIVLYGPGGQPVSETRSGSGQEQLSGTQSSSGSADATGT
TAEQSQPQKQAGVEATEKAPSAGGWVGVQIQDVTPQIARSLGYPDAKGALVAAVEPGSPA
AREGIEPGSIITAVDDTRIDGARDLASAISGHGEGEQVTLTLRTGAEETRQIAVTIGNRP
SRDEVGGDADQAEAARPRLGIAVASLSPGMRD
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgctgaacccgaacatgtgcagcgcggccgtcgtcgcgctcctgagccttccc
ttcgcgagtggaagcgtcctggcgcagcaggccggccaaacggatcaatccgcgacgccg
tcgcccaacgctcaacagccttttcggtcggagtcaggcggagtgcagcaggatgacctc
gtggccaccgtcggcgatgccgagatccgcggttccgacctgaggacgatcatcgggatg
ctaccgccgcagttgcaatcgcagccgccgcagatgctggtgccgcttgcgctggaacag
ctgatcctccgggaactgatcctcgaggaagcccgcagccagaacctcgccgacgatccc
gaagttgtcgcccttgtcgagaactccgcgcagactgtcgaggaggatgcgatggtgcag
gtctggctcgaccgggagacaaggggagctgtcaccgaggaggcggtccagcgcacgtat
gagaccattcagccgcgaggcggagcggccgtgccaccgctggaacaactgcgccctcag
atcgaacaacacctgcgtcagcaagcggctcaggagatccgaaacaggctccgccaaggt
gcggagatcgtcctctacggcccgggcggacaaccggtctcggagacgcggagcgggtca
gggcaagagcagcttagcggaacgcagagcagcagcgggtcggcagacgccaccggcacg
accgccgagcagagccagccgcagaagcaggcgggtgtagaggcgacggaaaaggcgcca
tccgcgggaggctgggtcggtgtgcagatccaggacgtcacaccgcagatcgcgcgctct
cttggctatcctgacgcgaaaggagcgctcgtggccgcggtcgaacccggaagccccgcc
gccagggagggcatcgagcccggttcgatcattaccgctgtagatgacacccggatcgat
ggggcacgtgatctcgcctcggcgatctcggggcacggagagggggagcaggtgacgctc
actcttcggacgggcgcggaagagacccggcagatcgccgtgactatcggcaatcgcccc
tcgcgcgacgaggtcggcggtgatgcggatcaggccgaggcggcgcggccacggcttggc
atcgcggtcgcaagcctctctcccggaatgagggactag
DBGET
integrated database retrieval system
