Silicimonas algicola: EF888_18220
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Entry
EF888_18220 CDS
T05779
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase (aminomethyl-transferring)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
salo
Silicimonas algicola
Pathway
salo00260
Glycine, serine and threonine metabolism
salo00630
Glyoxylate and dicarboxylate metabolism
salo00670
One carbon pool by folate
salo00785
Lipoic acid metabolism
salo01100
Metabolic pathways
salo01110
Biosynthesis of secondary metabolites
salo01200
Carbon metabolism
Module
salo_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
EF888_18220 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
EF888_18220 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
EF888_18220 (gcvP)
00670 One carbon pool by folate
EF888_18220 (gcvP)
Enzymes [BR:
salo01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
EF888_18220 (gcvP)
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Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AZQ68891
UniProt:
A0A316G5Z3
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Position
complement(3697205..3700057)
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AA seq
950 aa
AA seq
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MTFTPTDYLPYDFANRRHIGPSPAEMEAMLKTLGVASLDELIDQTIPSTIRQAEPLDFGK
PRSEREMLWEMRQIADRNEVFTTMIGQGYHGTVTPPAIQRNILENPAWYTAYTPYQPEIS
QGRLEALLNYQTMISDLTGLEIANASLLDEATAAAEAMTMAERTAKSKAKAFFIDENCHP
QNIAVMRTRAEPLDIEVIVGSPDDLEADKVFGAIFQYPGTYGHVRDFTPQIEALHAAGAL
GIVIADPLALTLLKEPGAMGADIAVGSTQRFGVPLGFGGPHAAYMACKDGLKRAMPGRLV
GVSIDARGNKAYRLSLQTREQHIRREKATSNVCTAQALLAVMASFYAVFHGPEGLKAIAQ
RVHRKTERLVMGLEAGGYAVEPKLFFDTITVEVGPMQGVIMEAGKRERINFRRVGTTKIG
MSVDESLRPATIEAVWRAFGLSYGRDDFEAGYTRLPQELHRTSEFLTHPIFHLNRAETEM
MRYMRRLADRDLALDRAMIPLGSCTMKLNAAVEMMPVTWPQFSNIHPFAPAEQVKGYTAM
IEDLCARLCTITGYDAMSMQPNSGAQGEYAGLLTIMAYHRARGDGARKVCLIPVSAHGTN
PASAQMCGMEVVVVKSAANGDVDVDDFRAKAEAAGNRLAACMITYPSTHGVFEETVSEVC
EITHAHGGQVYIDGANLNAMVGLAKPGDVGGDVSHLNLHKTFCIPHGGGGPGMGPIGVKA
HLAPFLPGHPHTGGREGPVSAAPYGSPGILVIPYAYLLLMGGAGLTQATRVAILNANYIA
KRLEGAFDVLFKGRKGRVAHECILDTRPFADSAGVTVDDIAKRLIDNGFHAPTMSWPVPG
TLMVEPTESETKAELDRFCDAMLHIREEIRAVETGEMERENNPLKNAPHTVEDLVGDWDR
PYSREAGCYPKGAFRVDKYWPPVNRVDNAWGDRHLVCTCPPLEDYAQAAE
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcacgccgaccgactaccttccctacgacttcgccaaccgccgccatatcggg
ccgtcgccggccgagatggaggcgatgctgaagacgcttggcgtcgcttcgctggacgag
ctgatcgaccagaccatcccctcgacgatccggcaggccgagccgctggacttcggcaag
ccccggtccgagcgcgagatgctctgggagatgcggcagatcgcggaccggaacgaggtc
ttcacgacgatgatcgggcaggggtatcacggcaccgtcaccccgcccgcgatccagcgc
aacatcctggagaacccggcctggtacacggcctatacgccgtatcagccggagatctcg
caggggcggctggaggcgcttctgaattaccagacgatgatctcggacctgacggggctc
gagatcgccaacgcctcgctcctggacgaggcgacggcggcggccgaagcgatgacgatg
gccgagcggacggcgaagtcgaaggccaaggccttcttcatcgacgagaactgccacccg
cagaacatcgcggtgatgcggacaagggccgagcctctggacatcgaggtgatcgtggga
tcgccggacgacctggaggcggacaaggttttcggcgcgatcttccagtatcccggcacc
tacgggcacgtccgggacttcacgccgcagatcgaggctctgcacgcggcgggggccctt
ggcatcgtcatcgcggacccgctggcgctgacgcttcttaaggagccgggcgcaatgggt
gcggatatcgctgtcgggtctacgcaacgcttcggggtgcctttgggcttcggcggaccg
catgcggcctacatggcgtgcaaggacgggctgaagcgggcgatgccggggcggctggtc
ggcgtgtcgatcgatgcacgagggaacaaggcgtaccgtctgtcgcttcagacccgcgag
cagcacatccggcgcgagaaggcgacgtcgaacgtctgcacggctcaggcgcttcttgcg
gtcatggcgtcgttctatgcggtgttccacggacccgaggggctgaaagccatcgcgcag
cgcgtccaccgcaagaccgagcggctggtgatggggctggaggcgggcggctatgccgtc
gagccgaagctgttcttcgacacgatcacggtcgaggtcggcccgatgcaaggcgtcatc
atggaggcgggcaagcgcgagcggatcaacttccgccgggtggggacgacgaagatcggg
atgtcggtcgacgagtcgctgcgtcccgcgaccatcgaggcggtgtggcgggccttcggg
ttgtcctacggccgagacgatttcgaggcggggtacacgcgcctgccgcaggagttgcac
cggacgagcgagttcctgacccatccgatctttcacctgaaccgggccgagaccgagatg
atgcgctacatgcgccgtctcgccgaccgggacctggcgctggaccgggcgatgatcccc
ctggggtcatgcaccatgaagctgaacgcggcggtcgagatgatgccggtcacctggcct
cagttttcgaacatccaccccttcgcaccggccgaacaggtgaagggctataccgcgatg
atcgaggacctctgcgctcggctctgcaccatcacgggctatgacgcgatgtcgatgcag
ccgaattcgggcgcgcagggcgaatacgcggggcttctgaccatcatggcctatcaccgc
gcgcgcggcgacggggcgcggaaggtctgcctgatcccggtgtcggcgcatggcacgaac
ccggccagcgcgcagatgtgcgggatggaggtcgtggtcgtgaagtcggcggcgaatggc
gacgtggacgtcgacgacttccgcgccaaggccgaggcggcgggcaaccggctggcggcc
tgcatgatcacctatccttcgacccacggcgtgttcgaggagactgtgagtgaggtctgc
gagatcacccacgcgcatggcgggcaggtctatatcgacggcgcgaacctcaatgcgatg
gtggggctcgcgaaacccggggacgtgggcggcgacgtcagccacctgaacctgcacaag
accttctgcatcccgcacggcggcggcggtcccggcatgggaccgatcggggtcaaggcg
catctggcgcccttcctgccggggcatccgcacaccggcggccgcgagggtccggtgtcg
gcggcgccttacggctcgccgggcatcctggtcattccctatgcctatctgctgctgatg
ggcggagccgggctgacgcaggcgacgcgggtggcgatcctgaacgcgaactatatcgcg
aagcggctggagggggccttcgacgttctgttcaaggggcgcaaggggagggtggcacac
gagtgcatcctcgacacccggccctttgccgacagcgcgggcgtgacggtggacgacatc
gccaagcggctgatcgacaacgggtttcacgcgccgacgatgagctggccggtgccagga
acgctgatggtcgagccgacggaatcggagacgaaggccgagctcgaccggttctgcgac
gcgatgctgcatatccgcgaggagatccgggccgtcgagacgggagagatggagcgcgag
aacaaccccctgaaaaatgcgccccacacggtcgaggacctggtcggcgactgggacagg
ccttatagccgcgaggccgggtgctatcccaagggagcgttccgcgtcgacaagtattgg
ccgccggtcaaccgtgtcgacaacgcctggggtgaccgtcacctggtctgcacctgcccg
ccgctggaggactatgcgcaggcggcggaatag
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