Silicimonas algicola: EF888_18995
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Entry
EF888_18995 CDS
T05779
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
salo
Silicimonas algicola
Pathway
salo00300
Lysine biosynthesis
salo00470
D-Amino acid metabolism
salo01100
Metabolic pathways
salo01110
Biosynthesis of secondary metabolites
salo01120
Microbial metabolism in diverse environments
salo01230
Biosynthesis of amino acids
Module
salo_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EF888_18995 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EF888_18995 (lysA)
Enzymes [BR:
salo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
EF888_18995 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AZQ69033
UniProt:
A0A316FZT3
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All DBs
Position
complement(3840572..3841849)
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AA seq
425 aa
AA seq
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MDHFLYRDGILHAEDVPLPEIAAAVGTPFYVYSTATLTRHYRLFQEALDGLDHLICYAMK
ANSNQAVLRLMASLGAGVDVVSGGEYRRAVAAGFPADRIVFSGVGKTAEEMELALRGGIR
QFNLESEPEMRRLSKVSESLGKIAPVTIRINPDVDARTHEKIATGKSENKFGIPISRARE
VYAEAASLPGLEVIGIDVHIGSQLTDLEPYEQAYLKVAELTHQLRADGHDIRRLDLGGGL
GILYERSNAAPPLPLDYGEVVRRTVGDLGCEIEIEPGRLIAGNSGLLVSEIIYMKQGEGR
TFAIVDAAMNDLIRPAMYGAHHDIVPVVEPEAGAELSPCDVVGPVCETGDTFTRNRPLPP
LAEGDLIAFRSAGAYGAVMASEYNSRPLVPEVLVHGHQFAVIRARPTFDEMINRDTIPEW
LEGPV
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggaccatttcctgtaccgcgacggcatccttcacgccgaggacgtgcctctccccgag
atcgccgctgcggtcgggacgccgttctacgtctactcgaccgccaccctgacgcgccac
taccgcctgttccaggaggcgctcgacggactcgaccacctgatctgctacgcgatgaaa
gccaattcgaatcaagcggttctgcggctgatggcgtcgctcggcgcgggtgtcgacgtg
gtctcgggcggcgaataccgccgcgccgtcgcagcaggatttccggccgaccgcatcgtc
ttctcgggcgtcggcaagacggccgaagagatggagctggccctgagaggcggcatccgc
cagttcaacctggaaagcgagcccgaaatgcgccgcctctccaaggtatcggaatcgcta
gggaaaatcgcccccgtcacgatccgcatcaaccctgacgtggacgccaggacgcacgag
aagatcgccaccggcaagtccgagaacaagttcggcatccccatttcccgagcccgcgag
gtctatgccgaagccgcctctctgccggggctcgaggtcatcggcatcgacgtccacatc
ggctcgcagctcaccgacctcgagccctacgagcaggcatacctcaaggtcgccgagctg
acccaccagctccgcgccgacggccacgacatccgccgcctcgatctaggcgggggcctt
ggcatcctctacgagcgctcgaacgccgcacccccgcttccgctcgactatggcgaggtg
gtgcgacggaccgtgggcgacctcggctgcgagatcgagatcgagcctggccggctgatc
gccggtaactcgggtctcttggtctcggaaataatctatatgaaacaaggcgaaggacgc
accttcgccatcgtcgacgcggcgatgaacgacctgatccgacccgcgatgtacggggca
caccatgacatcgtgcccgtcgtcgagcccgaggcgggagcggagctgagcccctgcgac
gtggtcggtccggtctgcgagacgggcgacaccttcacccgcaaccggcccctgccaccc
ctcgccgagggcgacctgatcgccttccgctcggccggcgcctatggggcggttatggcc
tcggagtacaactcccgcccgctggtgcccgaggtgctggtgcatgggcatcaattcgcc
gtcatccgggcacgacccacctttgacgagatgataaaccgcgataccatcccagagtgg
ctggaaggaccggtatga
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