Silicimonas algicola: EF888_21235
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Entry
EF888_21235 CDS
T05779
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
salo
Silicimonas algicola
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
salo03016
]
EF888_21235 (mnmE)
Transfer RNA biogenesis [BR:
salo03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
EF888_21235 (mnmE)
Prokaryotic type
Methyltransferases
EF888_21235 (mnmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
ABC_tran
RsgA_GTPase
AIG1
AAA_16
AAA_28
AAA_25
AAA_18
TniB
HflX_C
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AZQ69448
UniProt:
A0A316G940
LinkDB
All DBs
Position
complement(4280939..4282213)
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AA seq
424 aa
AA seq
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MDTIFALASARGRSGVAVVRLSGPQAFSALEQMAGRLPAPRRASLRTLLGAQGILDKALV
LTFPEPDSFTGEDVVELHLHGSVAVVDAVLRDLGRRSGLRLAEAGEFTRRALENERLDLS
QVEGLSDLIEAETEAQRKQAFRVFSGALGARAQSWRERLIRAAALLEATIDFADEDVPVD
VIPEVTVLIESVQRELIEEASGLKAAERVREGFEIAIVGPPNVGKSTLLNTLAGREAAIT
SSIAGTTRDVIEVRMNLSGLPVTLVDTAGLREAQDEIEAMGVDRARRRADAADLRVILKA
SAEDAPAVQPRDEDVVVVSKSDLVPGDFSALTGAGINQLIERITSVLEGRSAGAGLIIRE
RQARAVVNAATSLGIARDRLMTSDGVDLTAEDLRYAIGSLDSLVGRVDVEHVLDEIFSSF
CIGK
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggacacgatctttgccctggcgagcgcgcggggtcgctccggcgttgccgtggtgcgc
ctgtcaggaccgcaggcattctcggccttggagcagatggcgggacgattgcctgcgccg
cgccgtgcctctcttcgtacgcttctgggcgctcaagggatcctcgacaaggcgcttgtt
ctgacgtttcccgagccggacagctttacgggggaagacgtcgtcgaattgcacctgcac
ggttcagtcgccgtggtcgatgcggtgctgcgtgatctgggtagacggagtggcttgagg
ctggcggaggcaggcgagttcactaggcgagcgctcgagaacgagcggcttgacctgtca
caggttgaaggcctgtcggatctcatcgaggcggaaaccgaggctcagcgcaaacaggcg
tttcgcgttttctccggcgctctgggtgctagggcgcagtcctggcgggagcggttaatt
cgcgccgcagcgcttttggaggcgacgatagatttcgcagacgaggatgttccggtcgat
gtgatccccgaagtgacggttttgatcgaaagtgttcagcgtgagctaatagaggaagcg
tcgggcctgaaggcagcggaacgggtacgcgagggtttcgagatcgcgatcgtcggccct
cccaatgtcggcaagtccactctgctgaataccttggcgggacgagaggctgcgatcacc
tcgtcgatcgcgggcacgacccgcgacgtgatcgaagtcaggatgaacctctcggggctt
ccggtgacgctggtcgataccgctggacttcgtgaggcgcaggacgagatcgaagccatg
ggcgttgaccgcgctcggcgccgggcagacgctgcggacctgagggtgatcttgaaagcc
tcggccgaggatgcgcctgcagtccagcctcgcgatgaggatgtcgtggtcgtgtcgaag
tcggatcttgtacccggtgacttctcggcgctgacaggcgcgggcatcaatcaactcatc
gagcgcatcacctccgtccttgagggccggtcggctggtgcgggcttaatcattcgtgag
cggcaagcgcgtgccgtggtgaatgccgctacctctttgggaatcgcgcgcgatcggtta
atgacgtcggacggcgtggatctgaccgccgaagacttgcggtatgcaatcgggtcgctg
gatagcctggtgggtcgggtagacgtcgagcatgtgctcgacgagatattctcgagcttc
tgtattggaaagtag
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